Detailed information NTG0916794

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: U7118_RS03015
• Genome accession: NZ_CP141283
• Coordinates: 572424..573581 (+)
• Length: 385 a.a.
• NCBI ID: WP_003227983.1
• Uniprot ID: A0A199WDV9
• Organism: Bacillus subtilis strain DKU_09
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 567424..578581

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U7118_RS02990 (U7118_02990)	-	568142..568921 (-)	780	WP_014481059.1	hypothetical protein	-
U7118_RS02995 (U7118_02995)	-	568997..569449 (-)	453	WP_014481058.1	hypothetical protein	-
U7118_RS03000 (U7118_03000)	-	569500..569955 (-)	456	WP_046160907.1	hypothetical protein	-
U7118_RS03005 (U7118_03005)	-	570562..571554 (-)	993	WP_014481056.1	LCP family protein	-
U7118_RS03010 (U7118_03010)	-	571554..572207 (-)	654	WP_014481055.1	YigZ family protein	-
U7118_RS03015 (U7118_03015)	degS	572424..573581 (+)	1158	WP_003227983.1	two-component sensor histidine kinase DegS	Regulator
U7118_RS03020 (U7118_03020)	degU	573664..574353 (+)	690	WP_014481054.1	two-component system response regulator DegU	Regulator
U7118_RS03025 (U7118_03025)	fakBA	574451..575296 (+)	846	WP_014481053.1	DegV family protein	-
U7118_RS03030 (U7118_03030)	comFA	575403..576794 (+)	1392	WP_014481052.1	ATP-dependent helicase ComFA	Machinery gene
U7118_RS03035 (U7118_03035)	comFB	576854..577150 (+)	297	WP_003227989.1	late competence protein ComFB	-
U7118_RS03040 (U7118_03040)	comFC	577114..577836 (+)	723	WP_014481051.1	comF operon protein ComFC	Machinery gene
U7118_RS03045 (U7118_03045)	yvyF	577909..578328 (+)	420	WP_038429728.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44957.76 Da
• Isoelectric Point: 6.2957

>NTDB_id=916794 U7118_RS03015 WP_003227983.1 572424..573581(+) (degS) [Bacillus subtilis strain DKU_09]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=916794 U7118_RS03015 WP_003227983.1 572424..573581(+) (degS) [Bacillus subtilis strain DKU_09]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAAGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTGATCGAGCTTGGCGATAAACTTGAAGTGCAAACCCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGACGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATTGAGC
GGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAATCAGGATTTGCGCGAAGTTGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGGATTATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTCTCAAGAGA
AATCCATGACGGACCCGCTCAAATGCTGGCGAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GCGCAGAGGACGGATTCCAAGAAATTAAAAATCTACGCCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGAGAAACAGAGGATCAGAGGCTAGCGCCTCAGTTTGAGGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA

Domains

Predicted by InterproScan.

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

3D structure

• AlphaFold DB: A0A199WDV9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	100	100	1