Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   U2H13_RS15225 Genome accession   NZ_CP141181
Coordinates   3090285..3090425 (-) Length   46 a.a.
NCBI ID   WP_003152043.1    Uniprot ID   A3KLB4
Organism   Bacillus sp. A1     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3085285..3095425
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U2H13_RS15205 (U2H13_15170) - 3085582..3085965 (-) 384 WP_014418761.1 hotdog fold thioesterase -
  U2H13_RS15210 (U2H13_15175) comA 3085987..3086631 (-) 645 WP_014418762.1 response regulator transcription factor Regulator
  U2H13_RS15215 (U2H13_15180) comP 3086712..3089015 (-) 2304 WP_021495364.1 histidine kinase Regulator
  U2H13_RS15220 (U2H13_15190) comQ 3089141..3090100 (-) 960 WP_233662477.1 class 1 isoprenoid biosynthesis enzyme Regulator
  U2H13_RS15225 (U2H13_15195) degQ 3090285..3090425 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  U2H13_RS15230 (U2H13_15200) - 3090891..3091232 (+) 342 WP_007613435.1 hypothetical protein -
  U2H13_RS15235 (U2H13_15205) - 3091239..3092462 (-) 1224 WP_007613436.1 EAL and HDOD domain-containing protein -
  U2H13_RS15240 (U2H13_15210) - 3092592..3094058 (-) 1467 WP_014418767.1 nicotinate phosphoribosyltransferase -
  U2H13_RS15245 (U2H13_15215) - 3094076..3094627 (-) 552 WP_003152033.1 cysteine hydrolase family protein -
  U2H13_RS15250 (U2H13_15220) - 3094724..3095122 (-) 399 WP_003152031.1 YueI family protein -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5518.30 Da        Isoelectric Point: 4.9432

>NTDB_id=916273 U2H13_RS15225 WP_003152043.1 3090285..3090425(-) (degQ) [Bacillus sp. A1]
MENKLEEVKQLLFRLENDIRETTDSLRNINKSIDQLDKFSYAMKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=916273 U2H13_RS15225 WP_003152043.1 3090285..3090425(-) (degQ) [Bacillus sp. A1]
GTGGAAAACAAATTAGAAGAAGTAAAGCAATTATTATTCCGACTTGAAAATGATATCAGAGAAACAACCGACTCATTACG
AAACATTAACAAAAGCATTGATCAGCTCGATAAATTCTCATATGCAATGAAAATTTCTTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3KLB4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

89.13

100

0.891