NTDB

Overview

Name	comQ	Type	Regulator
Locus tag	U2H13_RS15220	Genome accession	NZ_CP141181
Coordinates	3089141..3090100 (-)	Length	319 a.a.
NCBI ID	WP_233662477.1	Uniprot ID	-
Organism	Bacillus sp. A1
Function	modification of ComX; production of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 3084141..3095100

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U2H13_RS15190 (U2H13_15155)	-	3084424..3084900 (+)	477	WP_154817911.1	Na+/H+ antiporter subunit E	-
U2H13_RS15195 (U2H13_15160)	-	3084900..3085184 (+)	285	WP_012118311.1	Na(+)/H(+) antiporter subunit F1	-
U2H13_RS15200 (U2H13_15165)	mnhG	3085168..3085542 (+)	375	WP_003152056.1	monovalent cation/H(+) antiporter subunit G	-
U2H13_RS15205 (U2H13_15170)	-	3085582..3085965 (-)	384	WP_014418761.1	hotdog fold thioesterase	-
U2H13_RS15210 (U2H13_15175)	comA	3085987..3086631 (-)	645	WP_014418762.1	response regulator transcription factor	Regulator
U2H13_RS15215 (U2H13_15180)	comP	3086712..3089015 (-)	2304	WP_021495364.1	histidine kinase	Regulator
U2H13_RS15220 (U2H13_15190)	comQ	3089141..3090100 (-)	960	WP_233662477.1	class 1 isoprenoid biosynthesis enzyme	Regulator
U2H13_RS15225 (U2H13_15195)	degQ	3090285..3090425 (-)	141	WP_003152043.1	degradation enzyme regulation protein DegQ	Regulator
U2H13_RS15230 (U2H13_15200)	-	3090891..3091232 (+)	342	WP_007613435.1	hypothetical protein	-
U2H13_RS15235 (U2H13_15205)	-	3091239..3092462 (-)	1224	WP_007613436.1	EAL and HDOD domain-containing protein	-
U2H13_RS15240 (U2H13_15210)	-	3092592..3094058 (-)	1467	WP_014418767.1	nicotinate phosphoribosyltransferase	-
U2H13_RS15245 (U2H13_15215)	-	3094076..3094627 (-)	552	WP_003152033.1	cysteine hydrolase family protein	-

Sequence

Protein

Download Length: 319 a.a. Molecular weight: 36655.97 Da Isoelectric Point: 5.1474

                                >NTDB_id=916272 U2H13_RS15220 WP_233662477.1 3089141..3090100(-) (comQ) [Bacillus sp. A1]

MKSIIERNIFNEHLMQLLLSFIEPKKNFSLAESAVLHYVIFDGENQETAVNLGAAIEILTLTSDIIDDLEDEDNRDAPWM

KIDRSLALSAAFSLYTAGLQSINSISTNPLVIKYVLKYIQDAMQGQHDDLINKPKTEDECLEVIKLKCGSLFALANVTGT

LLATGEFNKSVESYSYYKGIFEQISGDYHAIFKDNTSDILKDKHTLINLYLKRLFNKSSQELLCIFSDQKLYSQLRLNKK

EFIQKLYDSGASQYVSVLYQLYMYKCETEVENLNLDIKKIKIIKKHLLNNKNNKKDDEDAEFNKLFFELSGCIKETEKQ

Nucleotide

Download Length: 960 bp

                                >NTDB_id=916272 U2H13_RS15220 WP_233662477.1 3089141..3090100(-) (comQ) [Bacillus sp. A1]

ATGAAGAGTATAATAGAGCGGAACATATTTAATGAACATCTAATGCAGCTCCTTCTCAGTTTTATTGAACCAAAAAAAAA

TTTTTCTCTAGCTGAATCAGCTGTTTTGCATTATGTGATCTTTGACGGCGAAAATCAAGAAACCGCAGTGAACTTAGGTG

CCGCTATTGAAATTCTTACACTTACTTCCGATATAATTGATGATCTGGAAGATGAGGATAATCGAGATGCTCCTTGGATG

AAGATAGATCGTTCACTAGCATTAAGTGCAGCATTTTCATTATACACAGCAGGATTGCAAAGCATTAATTCGATTAGTAC

GAATCCTTTAGTGATTAAGTATGTATTAAAATATATTCAAGATGCAATGCAGGGTCAACATGATGATTTGATCAATAAAC

CAAAGACAGAAGATGAATGTTTAGAGGTAATCAAGTTAAAATGCGGAAGTTTATTTGCGTTAGCAAATGTTACTGGTACG

CTTTTAGCAACTGGAGAATTCAATAAGTCTGTTGAAAGTTATTCCTATTATAAAGGGATATTTGAACAAATTTCCGGCGA

TTATCATGCTATTTTTAAGGATAATACTAGTGATATTCTGAAAGATAAACATACATTGATTAATTTATATCTTAAGCGCT

TGTTTAATAAGTCTTCTCAAGAATTGCTTTGTATATTCTCAGATCAAAAATTATATTCGCAACTGCGGCTTAATAAAAAA

GAGTTTATTCAAAAGCTGTATGATTCTGGAGCATCTCAATATGTTTCGGTTTTATACCAACTATACATGTATAAGTGTGA

AACTGAAGTTGAAAATTTAAATTTAGATATAAAGAAGATAAAAATAATAAAAAAACACTTGTTGAATAATAAGAATAATA

AGAAGGATGATGAAGATGCAGAATTTAATAAATTATTTTTTGAATTATCCGGATGTATTAAAGAAACTGAAAAGCAATGA

Domains

Predicted by InterproScan.

Polyprenyl synthetase (polyprenyl_synt)

(41-214)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
comQ	Bacillus subtilis subsp. subtilis str. 168	61.938	90.596	0.561

Detailed information NTG0916272