Detailed information NTG0915323

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: ABYM97_RS17690
• Genome accession: NZ_CP159874
• Coordinates: 3391542..3392147 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain PY79
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3386542..3397147

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABYM97_RS17660 (ABYM97_17660)	-	3387355..3387744 (+)	390	WP_004398667.1	TIGR04086 family membrane protein	-
ABYM97_RS17665 (ABYM97_17665)	yajC	3387801..3388067 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
ABYM97_RS17670 (ABYM97_17670)	tgt	3388104..3389249 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
ABYM97_RS17675 (ABYM97_17675)	queA	3389276..3390304 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
ABYM97_RS17680 (ABYM97_17680)	yrzS	3390334..3390534 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
ABYM97_RS17685 (ABYM97_17685)	ruvB	3390527..3391531 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
ABYM97_RS17690 (ABYM97_17690)	ruvA	3391542..3392147 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
ABYM97_RS17695 (ABYM97_17695)	bofC	3392286..3392798 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
ABYM97_RS17700 (ABYM97_17700)	csbX	3392846..3394153 (-)	1308	WP_003246197.1	MFS transporter	-
ABYM97_RS17705 (ABYM97_17705)	iolG	3394224..3395249 (-)	1026	WP_004398990.1	inositol 2-dehydrogenase	-
ABYM97_RS17710 (ABYM97_17710)	yrzF	3395487..3396134 (+)	648	WP_003246159.1	phosphotransferase	-
ABYM97_RS17715 (ABYM97_17715)	-	3396180..3396302 (-)	123	WP_003229707.1	hypothetical protein	-
ABYM97_RS17720 (ABYM97_17720)	yrzH	3396387..3396677 (+)	291	WP_003246047.1	DUF5412 family protein	-
ABYM97_RS17725 (ABYM97_17725)	-	3396684..3396824 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=915323 ABYM97_RS17690 WP_003229717.1 3391542..3392147(-) (ruvA) [Bacillus subtilis strain PY79]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=915323 ABYM97_RS17690 WP_003229717.1 3391542..3392147(-) (ruvA) [Bacillus subtilis strain PY79]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAAGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTATGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408