Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   U6038_RS10615 Genome accession   NZ_CP140715
Coordinates   2207021..2207728 (+) Length   235 a.a.
NCBI ID   WP_004696183.1    Uniprot ID   A0A7H8SJ59
Organism   Acinetobacter johnsonii strain FAHZZU3110hy     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2202021..2212728
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U6038_RS10605 (U6038_10605) clpB 2203477..2206056 (-) 2580 WP_058869955.1 ATP-dependent chaperone ClpB -
  U6038_RS10610 (U6038_10610) - 2206447..2206869 (-) 423 WP_279739542.1 OsmC family protein -
  U6038_RS10615 (U6038_10615) crp 2207021..2207728 (+) 708 WP_004696183.1 cAMP-activated global transcriptional regulator CRP Regulator
  U6038_RS10620 (U6038_10620) - 2207915..2208964 (+) 1050 WP_333653103.1 NADP(H)-dependent aldo-keto reductase -
  U6038_RS10625 (U6038_10625) - 2209145..2209918 (-) 774 WP_333653106.1 M48 family metallopeptidase -
  U6038_RS10630 (U6038_10630) - 2210101..2210406 (-) 306 WP_004696180.1 hypothetical protein -
  U6038_RS10635 (U6038_10635) - 2210607..2211926 (-) 1320 WP_125273518.1 adenylosuccinate synthase -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 26414.97 Da        Isoelectric Point: 4.6788

>NTDB_id=915127 U6038_RS10615 WP_004696183.1 2207021..2207728(+) (crp) [Acinetobacter johnsonii strain FAHZZU3110hy]
MTSSFSQLSTDALSPGQLPESVKALLKRAYINRYPKRTTIVDAGSESKSLYLILKGSVSIILREDDEREIVVAYLNAGDF
FGEMGLFEANSQRTAEVRTRDVCEIAEVTYENFHELSKQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEEQGMIETDGKAILIFDASLEESKANADDYEDEE

Nucleotide


Download         Length: 708 bp        

>NTDB_id=915127 U6038_RS10615 WP_004696183.1 2207021..2207728(+) (crp) [Acinetobacter johnsonii strain FAHZZU3110hy]
ATGACTTCAAGCTTTTCACAATTAAGCACTGATGCGCTGTCTCCAGGTCAACTCCCCGAGTCAGTCAAAGCATTATTAAA
ACGCGCATATATTAATCGTTATCCTAAGCGTACCACCATCGTAGATGCAGGCTCAGAATCTAAATCTTTATATTTGATTT
TAAAAGGTTCGGTCTCCATTATTCTGCGTGAAGACGATGAACGTGAAATCGTGGTCGCTTATTTAAATGCGGGTGATTTT
TTTGGAGAAATGGGTCTATTCGAAGCAAACTCACAACGTACTGCAGAAGTGCGTACCCGTGATGTCTGCGAAATTGCTGA
AGTGACTTATGAAAACTTCCATGAACTCAGTAAACAATACCCTGACCTGAGCTATGCCGTATTTGCACAGCTGGTACGCC
GTCTAAAAAATACCACTCGTAAAGTGACTGACCTTGCCTTTATCGATGTTTCAGGTCGTATTGCACGTTGCCTCATCGAC
CTATCTTCGCAGCCTGAAGCGATGATTTTACCAAATGGCCGCCAAATTCGTATTACGCGTCAAGAGATTGGACGTATTGT
CGGTTGTTCACGTGAAATGGTTGGTCGTGTTTTGAAAACACTCGAAGAGCAAGGCATGATCGAAACTGATGGTAAAGCCA
TCTTAATTTTTGATGCCTCTTTAGAAGAGTCAAAAGCGAATGCTGATGACTATGAAGACGAAGAATAA

Domains

Predicted by InterproScan.

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)

Bacterial regulatory proteins, crp family (Crp)

(176-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H8SJ59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

91.064

100

0.911
  crp Vibrio cholerae strain A1552

46.602

87.66

0.409
  crp Haemophilus influenzae Rd KW20

48.205

82.979

0.4