Detailed information NTG0915104

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: U6038_RS01160
• Genome accession: NZ_CP140715
• Coordinates: 237724..239088 (-)
• Length: 454 a.a.
• NCBI ID: WP_417884541.1
• Uniprot ID: -
• Organism: Acinetobacter johnsonii strain FAHZZU3110hy
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 232724..244088

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U6038_RS01145 (U6038_01145)	lptG	233784..234854 (+)	1071	WP_279043185.1	LPS export ABC transporter permease LptG	-
U6038_RS01150 (U6038_01150)	gpmI	234978..236525 (+)	1548	WP_279735365.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
U6038_RS01155 (U6038_01155)	-	236544..237719 (+)	1176	WP_333654781.1	S41 family peptidase	-
U6038_RS01160 (U6038_01160)	pilR	237724..239088 (-)	1365	WP_417884541.1	sigma-54-dependent transcriptional regulator	Regulator
U6038_RS01165 (U6038_01165)	pilS	239161..240729 (-)	1569	WP_333654786.1	sensor histidine kinase	Regulator
U6038_RS01170 (U6038_01170)	-	240751..241386 (-)	636	WP_004692836.1	response regulator	-
U6038_RS01175 (U6038_01175)	-	241602..242657 (+)	1056	WP_125273423.1	serine hydrolase	-
U6038_RS01180 (U6038_01180)	thrC	242744..243883 (-)	1140	WP_004692833.1	threonine synthase	-

Sequence

Protein

• Length: 454 a.a.
• Molecular weight: 51017.70 Da
• Isoelectric Point: 6.8692

>NTDB_id=915104 U6038_RS01160 WP_417884541.1 237724..239088(-) (pilR) [Acinetobacter johnsonii strain FAHZZU3110hy]
MQMSLSRMGIDTHIAYRLQEAVQALKTHQYDACLTDLNLPDGNGLSLVDFIAQNYPNLPVAVLTAYGNMDIAIAALKAGA
FDFVSKPINQKHLEQLLQKAFNQPISQLHIQEDTLEHRLLIGQSLPIQQLRITLKKIARSQAPVFITGESGTGKEVVANL
VHRLSNRNEGPFIAINCGAIPTELMESELFGHRKGSFTGATQDKQGLILSAHGGSLFLDEIAELPLTMQVKLLRAVQEKR
IRPIGSDTEIDVDFRVISASHQDLEALVQQGKFRQDLYFRIHVMDIVLPALRERGNDIILLAQHFIQKICQEWDIPVKPL
SERAREFLLAQYYPGNVRELRNMMERAITLSDESSIDLPHLQTAPLRPIAQTNYANATQQGAVGNDQLSHVPSRKLPEEG
LELYLEKIEKEILMNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDGEDDSV

Nucleotide

• Length: 1365 bp

>NTDB_id=915104 U6038_RS01160 WP_417884541.1 237724..239088(-) (pilR) [Acinetobacter johnsonii strain FAHZZU3110hy]
ATGCAAATGTCTTTAAGTCGGATGGGGATTGATACACATATTGCCTATCGCTTACAAGAAGCGGTTCAAGCCCTGAAAAC
GCATCAATATGATGCCTGTCTAACCGATCTTAATTTACCCGATGGTAATGGCCTGAGCTTGGTCGATTTTATTGCTCAAA
ATTATCCTAATTTACCCGTTGCAGTGCTGACTGCTTACGGCAATATGGATATTGCGATTGCAGCACTGAAAGCTGGTGCT
TTTGATTTTGTCAGTAAACCGATCAACCAAAAACATTTAGAGCAACTTTTACAAAAAGCCTTTAATCAGCCCATCAGTCA
GCTGCATATCCAAGAAGATACGCTTGAACATCGTCTGCTGATTGGTCAGTCCCTTCCTATTCAGCAACTACGCATCACCT
TAAAGAAAATTGCACGCTCGCAAGCCCCTGTCTTTATTACGGGTGAATCAGGCACTGGCAAAGAAGTGGTGGCTAATCTG
GTACATCGCCTGAGCAATCGCAATGAAGGACCATTTATTGCCATCAACTGCGGTGCCATACCGACTGAACTGATGGAAAG
TGAATTGTTTGGACACCGTAAGGGTAGCTTTACAGGAGCGACTCAAGACAAACAAGGGCTGATTCTGTCTGCGCATGGCG
GCAGTTTATTTTTAGATGAAATTGCTGAGTTACCACTCACTATGCAGGTAAAACTGCTGCGCGCGGTACAAGAAAAACGT
ATTCGTCCCATTGGGAGTGATACCGAAATTGATGTCGATTTCCGTGTGATTAGTGCCAGCCATCAAGACTTAGAAGCACT
GGTGCAACAAGGCAAGTTCCGTCAGGATTTGTACTTCCGCATCCATGTCATGGACATTGTGCTGCCTGCTCTACGTGAGC
GTGGCAATGACATTATTCTTTTGGCACAACATTTCATTCAAAAAATCTGCCAAGAATGGGACATCCCAGTCAAACCACTG
AGTGAACGTGCACGTGAGTTTTTATTGGCCCAATATTATCCAGGCAATGTGCGTGAACTACGCAATATGATGGAACGTGC
CATCACTTTAAGTGATGAAAGCAGTATCGACTTACCACACTTGCAAACAGCCCCACTGCGACCGATTGCTCAGACCAACT
ATGCCAATGCCACCCAACAAGGTGCTGTTGGCAATGATCAACTCAGTCATGTGCCTTCGCGTAAATTGCCCGAAGAGGGT
TTAGAGCTGTATTTAGAAAAAATTGAAAAAGAAATTTTGATGAATGCGCTCAATCTCACCCACTGGAACCGTACTCTGGC
GGCTAAAAAGCTCGGCATGTCTTTCCGTTCTTTACGTTATCGCTTGAAAAAATTTGGGTTAGATGGCGAAGACGATTCCG
TTTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (4-97)

• Bacterial regulatory protein, Fis family (HTH_8) (405-445)

• Sigma-54 interaction domain (Sigma54_activat) (120-286)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	74.67	100	0.747
pilR	Pseudomonas aeruginosa PAK	49.446	99.339	0.491