Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   L6450_RS12885 Genome accession   NZ_AP025340
Coordinates   2525761..2528076 (-) Length   771 a.a.
NCBI ID   WP_020452789.1    Uniprot ID   D9YRL1
Organism   Bacillus paralicheniformis strain J36TS2     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 2520761..2533076
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L6450_RS12845 - 2521226..2521657 (+) 432 WP_003184834.1 Na(+)/H(+) antiporter subunit B -
  L6450_RS12850 - 2521657..2521998 (+) 342 WP_020452785.1 Na(+)/H(+) antiporter subunit C -
  L6450_RS12855 - 2521991..2523469 (+) 1479 WP_020452786.1 Na+/H+ antiporter subunit D -
  L6450_RS12860 - 2523475..2523951 (+) 477 WP_020452787.1 Na+/H+ antiporter subunit E -
  L6450_RS12865 - 2523951..2524235 (+) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  L6450_RS12870 mnhG 2524219..2524593 (+) 375 WP_023856153.1 monovalent cation/H(+) antiporter subunit G -
  L6450_RS12875 - 2524630..2525019 (-) 390 WP_009329508.1 hotdog fold thioesterase -
  L6450_RS12880 comA 2525036..2525674 (-) 639 WP_003184849.1 response regulator transcription factor Regulator
  L6450_RS12885 comP 2525761..2528076 (-) 2316 WP_020452789.1 sensor histidine kinase Regulator
  L6450_RS12890 comX 2528097..2528267 (-) 171 WP_020452790.1 competence pheromone ComX -
  L6450_RS12895 - 2528239..2529150 (-) 912 WP_020452791.1 polyprenyl synthetase family protein -
  L6450_RS12900 degQ 2529337..2529477 (-) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  L6450_RS12905 - 2529963..2530310 (+) 348 WP_223254849.1 hypothetical protein -
  L6450_RS12910 - 2530353..2531573 (-) 1221 WP_020452793.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 771 a.a.        Molecular weight: 89288.10 Da        Isoelectric Point: 7.0414

>NTDB_id=91403 L6450_RS12885 WP_020452789.1 2525761..2528076(-) (comP) [Bacillus paralicheniformis strain J36TS2]
MKSYYNKVSLVLILLSFIYVLYVCYLSFNNNLVGLKVKNLDEYSLEVVEVKKHTLAADYAELKEGDIIHRINGQQVPFKK
DKEYTLSNVLTLTIERNGKVFENDSLIYLDLVSYDSFFIFIIPLIFYFLCLICVYFIFKVNKSKNLFSAFLLVLFLLITS
IAYVSAGAVARGDTFSRFVNILTFLAVPTSYLHFIYRYFKEIGKTFFSNKVFLLYLIPFINLILEAGLYLFEFEGSILKS
INLLSFFISTVIVFILITYALIKFKYSQQSYLLKILMLMNFIALVPFLFFYVLPMLVFGDYIFSAIVVSPFLLLIPLSLV
YQFMSNKIYDIEFLIGRLKYYSFLAIIPTSLIITILAIVKHQEGEFFTVQVTIFTYLIMVGVFYLKEIIDFRFRLKRFSE
KFNYQDSIFKFTQTIRTFTSLNQVLMELKQIVLDVLLVNNIYMLKVKNDGSVSMLENDAEEKPWIPYEQEVTKVITDIGK
IVEVDRGFLIKIGERGGTSYVMLCLSVLNTPRLTRDEISWLETLAFYTSVSLENVLKIGELMEHLEHVKKEGPNPAWLNK
LMFAIEEKQRSDLARDLHDSVLQDMISLKHQSEMFLADFEKDKVCTNQIRQRLINMNEQMSTVIQTTRETCQELRPQLLY
DLGLVKALSKLAAQHQESSSIDKIRLNTERFSKVLDLDTQLNLYRIVQELLSNAVKHSKANEVLIMLVCIKEKVVLHYED
DGIGFDPDKLYQNSASMGLSGIRERVRALNGSLDIQTAEGKGFRVAIEMEL

Nucleotide


Download         Length: 2316 bp        

>NTDB_id=91403 L6450_RS12885 WP_020452789.1 2525761..2528076(-) (comP) [Bacillus paralicheniformis strain J36TS2]
ATGAAGTCATATTATAACAAGGTTTCACTAGTTCTCATATTGTTAAGTTTTATTTATGTTCTCTATGTTTGCTATCTTAG
TTTTAATAATAATCTAGTTGGGTTAAAGGTGAAAAATCTTGATGAATACAGTCTTGAAGTTGTGGAAGTGAAAAAACACA
CTTTAGCCGCTGATTATGCAGAATTAAAAGAAGGAGATATCATTCATAGAATAAATGGGCAGCAGGTTCCATTTAAAAAA
GATAAGGAATATACATTGTCAAACGTTTTAACGTTAACAATTGAAAGAAATGGGAAAGTATTTGAGAATGATTCTCTGAT
ATATTTGGATTTAGTCAGTTATGACAGTTTTTTTATATTTATCATTCCGTTGATCTTTTACTTTTTATGTTTAATTTGTG
TGTATTTTATTTTTAAAGTAAACAAATCTAAAAATCTTTTCTCAGCATTTTTATTAGTCCTATTTCTGCTTATTACTTCT
ATAGCTTATGTTAGTGCAGGCGCAGTTGCAAGAGGTGACACTTTCAGTAGATTTGTAAATATACTTACTTTTTTAGCTGT
TCCAACTAGCTACTTACATTTTATTTATCGATACTTTAAAGAGATAGGGAAAACATTTTTCAGTAATAAAGTTTTTTTAC
TTTATTTAATACCATTTATAAACCTCATACTTGAAGCTGGTTTATACTTATTTGAATTTGAGGGAAGTATTCTAAAAAGT
ATTAACTTATTGTCGTTCTTTATTTCGACGGTTATTGTTTTTATTCTGATTACATATGCCTTAATTAAATTCAAGTATTC
TCAACAGTCCTACTTATTGAAAATATTAATGTTGATGAACTTCATTGCATTGGTACCTTTTTTGTTTTTCTATGTACTTC
CTATGCTGGTCTTTGGCGATTATATTTTCTCGGCCATTGTTGTGTCCCCGTTTCTGTTGCTGATTCCTTTATCTTTGGTA
TATCAATTTATGTCTAATAAAATATATGATATTGAATTTTTAATTGGTCGATTGAAATATTATAGTTTTTTAGCGATAAT
TCCAACTTCTTTAATTATTACTATTTTAGCCATTGTTAAGCATCAAGAAGGAGAATTTTTCACAGTACAGGTTACAATCT
TTACATATCTTATCATGGTAGGCGTTTTCTATTTAAAAGAAATTATTGATTTTCGCTTTCGGCTAAAGCGCTTTTCAGAA
AAATTTAACTACCAGGATAGTATTTTTAAATTTACTCAAACCATTCGAACATTTACGTCTTTAAATCAAGTTTTAATGGA
GTTAAAACAAATCGTTTTGGACGTGCTTCTTGTTAATAATATTTATATGCTCAAAGTAAAAAACGATGGATCGGTATCGA
TGCTAGAGAATGATGCAGAAGAAAAACCGTGGATCCCGTACGAACAAGAAGTAACCAAGGTCATCACCGACATCGGCAAA
ATCGTCGAAGTCGACCGCGGATTTTTGATTAAGATCGGTGAACGGGGCGGGACTTCTTATGTCATGCTGTGTTTGTCGGT
TTTAAATACGCCTAGGCTGACGCGCGATGAGATTTCGTGGCTTGAGACGCTGGCGTTTTATACGAGTGTTTCCCTGGAAA
ACGTCTTGAAAATCGGCGAGCTGATGGAGCATCTGGAACATGTGAAAAAAGAAGGGCCGAATCCGGCGTGGCTGAATAAA
TTGATGTTTGCGATTGAAGAGAAGCAGAGATCTGATTTGGCCCGTGATCTTCATGATTCTGTGCTGCAGGACATGATTTC
CTTGAAGCATCAAAGCGAGATGTTTCTGGCTGATTTTGAAAAAGATAAAGTCTGTACGAATCAAATCAGGCAAAGGCTCA
TCAATATGAATGAGCAAATGTCCACCGTCATCCAGACGACAAGGGAAACGTGTCAGGAGCTGAGGCCGCAGCTGTTGTAC
GATCTCGGACTGGTCAAAGCCCTTTCGAAACTGGCGGCACAGCATCAGGAGTCCTCATCGATCGATAAGATCCGCCTCAA
TACGGAAAGGTTCTCAAAGGTGCTCGACCTGGACACGCAGCTGAATTTGTACAGAATTGTGCAGGAGCTTTTAAGCAATG
CGGTTAAACACTCGAAAGCTAATGAGGTTTTGATTATGCTTGTCTGCATAAAAGAAAAAGTTGTTCTTCATTATGAAGAT
GACGGCATCGGTTTTGATCCGGACAAGCTTTATCAAAACAGCGCAAGCATGGGGCTGTCGGGTATTCGCGAGCGAGTCCG
CGCGCTGAACGGCAGTCTGGATATACAGACAGCAGAAGGGAAAGGCTTCAGGGTCGCCATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(682-769)

Histidine kinase (HisKA_3)

(570-639)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB D9YRL1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

53.419

100

0.537

Multiple sequence alignment