Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   U2873_RS15260 Genome accession   NZ_CP140276
Coordinates   2933969..2936281 (-) Length   770 a.a.
NCBI ID   WP_171465713.1    Uniprot ID   -
Organism   Bacillus altitudinis strain F7     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2928969..2941281
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U2873_RS15220 (U2873_15220) - 2929375..2929806 (+) 432 WP_008345843.1 Na(+)/H(+) antiporter subunit B -
  U2873_RS15225 (U2873_15225) - 2929806..2930147 (+) 342 WP_003213576.1 Na(+)/H(+) antiporter subunit C -
  U2873_RS15230 (U2873_15230) - 2930140..2931618 (+) 1479 WP_322535993.1 Na+/H+ antiporter subunit D -
  U2873_RS15235 (U2873_15235) - 2931625..2932104 (+) 480 WP_008345848.1 Na+/H+ antiporter subunit E -
  U2873_RS15240 (U2873_15240) - 2932104..2932385 (+) 282 WP_008345849.1 Na(+)/H(+) antiporter subunit F1 -
  U2873_RS15245 (U2873_15245) mnhG 2932369..2932743 (+) 375 WP_003213369.1 monovalent cation/H(+) antiporter subunit G -
  U2873_RS15250 (U2873_15250) - 2932834..2933223 (-) 390 WP_008345855.1 hotdog fold thioesterase -
  U2873_RS15255 (U2873_15255) comA 2933247..2933888 (-) 642 WP_007500477.1 response regulator transcription factor Regulator
  U2873_RS15260 (U2873_15260) comP 2933969..2936281 (-) 2313 WP_171465713.1 ATP-binding protein Regulator
  U2873_RS15265 (U2873_15265) comX 2936339..2936506 (-) 168 WP_108611760.1 competence pheromone ComX -
  U2873_RS15270 (U2873_15270) - 2936503..2937417 (-) 915 WP_108611759.1 polyprenyl synthetase family protein -
  U2873_RS15275 (U2873_15275) degQ 2937569..2937709 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  U2873_RS15280 (U2873_15280) - 2938215..2938568 (+) 354 WP_017358939.1 hypothetical protein -
  U2873_RS15285 (U2873_15285) - 2938645..2939996 (+) 1352 WP_286108591.1 IS3 family transposase -
  U2873_RS15290 (U2873_15290) - 2940047..2941273 (-) 1227 WP_171465721.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89454.05 Da        Isoelectric Point: 8.2410

>NTDB_id=913445 U2873_RS15260 WP_171465713.1 2933969..2936281(-) (comP) [Bacillus altitudinis strain F7]
MKLTYTKWSTIFVFLSFLFVIYISYIYVFDIFNGARVEKNGHGQTEVVNVEYLSLAYSSGLKEGDIILKINGQSNLIQDH
MINGKLRNVQRIDIQRGNQIISLKNKTLIGRESLFVYLIPLLLYSICLFCIFFIIKINKEPQRKSAFLLILFLLSICVGY
LSAGTSGIGDKFSHYVLFLCLSSVSILYIHFIYQYFKEFDVHITNLKLIKCLYLIPIFNLLVHSGVSVSSEWRKFVPSIS
LLFFFGTVLTALFLIVRGMKRYKETEHGSVLKFFAIMNILSFCPFIFFFVIPYVFFDKYLIDPFILTSVVLLIPFSLVYQ
FVTNKIYNMNFLISRLRYYGFLAITPTIFVVVIFYILQKPEDLKYTLKLAIITYTLMLGVFYFKEIIDFRFRLKRFSEKH
NYQDSVFKFTQLIREASSLHQVLFHLKYTILEVLVVNKAFVLEVKADGQIEEIDESTDDSSLWKEYVDQFQDILGEVGKI
IELNKGFMMKIGERGGHSFVICCLSNLRTPKLTRDEISWLKTLAFYTSVSLENVVKIEELMEHLEDLKQREANPAWLKKV
MFAMEEKQRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNNQCPTSIENSLISWNEQMSKVIQTTRETCHELRPQLLYDL
GLVKAISKLTSQIQEEAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHSKASQVLVMLICIKDQVVLHYEDD
GVGFDASQLDQHTMSMGLSGIRERVKALNGKLQIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=913445 U2873_RS15260 WP_171465713.1 2933969..2936281(-) (comP) [Bacillus altitudinis strain F7]
ATGAAGCTTACCTATACAAAATGGTCCACAATTTTTGTGTTTTTGTCTTTTTTATTTGTGATCTATATTTCTTATATATA
TGTTTTTGATATTTTTAATGGAGCACGCGTAGAAAAGAATGGACACGGTCAAACGGAAGTAGTTAATGTTGAATATCTTT
CTTTAGCTTATTCTTCAGGCTTAAAAGAGGGAGATATAATATTAAAGATAAACGGACAGTCTAATTTAATTCAAGACCAT
ATGATCAATGGTAAGCTTAGAAATGTACAAAGGATTGATATTCAAAGAGGCAACCAAATCATTTCGCTTAAAAATAAGAC
GTTGATTGGCAGAGAAAGTTTGTTTGTCTATTTAATTCCTCTTCTTCTCTATTCAATATGCTTATTCTGTATCTTTTTTA
TTATTAAAATCAATAAGGAACCACAACGAAAATCTGCTTTTCTATTAATTTTGTTCCTATTATCAATTTGTGTCGGGTAT
TTGAGCGCAGGTACTTCAGGAATTGGAGATAAATTTAGCCACTATGTTCTTTTTTTGTGTTTATCTAGTGTGTCCATCTT
ATATATTCACTTTATCTATCAATATTTCAAGGAATTTGATGTTCACATAACGAATCTTAAATTAATTAAGTGCTTATACC
TTATACCAATTTTTAATCTTCTCGTACATAGTGGGGTTTCTGTGTCATCTGAATGGAGAAAGTTTGTTCCAAGTATAAGT
TTGTTGTTTTTTTTCGGAACGGTATTAACAGCACTTTTTTTAATAGTCAGAGGCATGAAGAGATATAAAGAAACAGAACA
TGGTTCCGTATTAAAGTTTTTTGCCATTATGAATATTCTATCGTTCTGTCCATTTATTTTCTTTTTTGTCATTCCCTATG
TGTTTTTTGATAAGTATTTGATAGATCCTTTTATTCTGACATCTGTTGTTTTGTTAATTCCTTTTTCACTTGTTTATCAA
TTCGTGACAAACAAAATTTATAATATGAACTTCTTGATCAGCAGACTGAGGTACTATGGATTTCTCGCCATTACTCCTAC
TATTTTTGTCGTTGTAATATTTTATATTTTACAGAAACCAGAAGACCTGAAGTACACACTTAAGCTCGCAATAATCACCT
ACACTTTAATGCTAGGAGTCTTTTACTTCAAAGAAATCATCGATTTCCGTTTTCGCCTGAAGCGTTTTTCGGAAAAGCAT
AACTATCAGGACAGTGTGTTTAAATTTACACAGCTTATTCGTGAGGCGTCGTCACTGCATCAAGTGCTGTTTCATTTGAA
GTACACCATTTTGGAAGTGCTTGTGGTGAATAAAGCCTTTGTGCTTGAAGTGAAGGCAGATGGCCAAATAGAAGAGATTG
ATGAATCGACAGATGACAGCAGCTTGTGGAAAGAGTATGTCGATCAATTTCAAGACATTTTAGGCGAAGTAGGGAAAATT
ATCGAGCTTAATAAAGGGTTTATGATGAAAATTGGTGAGCGGGGCGGTCACTCGTTTGTGATTTGCTGTTTATCTAATTT
ACGGACACCTAAGCTGACCCGCGATGAAATTTCATGGCTGAAAACATTGGCATTTTACACAAGTGTCAGTTTAGAAAATG
TCGTTAAGATCGAAGAACTGATGGAGCATCTTGAGGATTTGAAACAGCGGGAAGCCAATCCCGCCTGGCTGAAGAAAGTC
ATGTTCGCCATGGAAGAAAAGCAGCGTTCAGATTTAGCAAGGGATCTTCATGATTCTGTGCTGCAGGATTTGATTTCACT
GAAGAGACAGTCCGAGATGTTCTTAACCAATTTCCAAAACAACCAATGCCCAACATCTATTGAAAATTCGCTGATCTCTT
GGAATGAACAAATGTCTAAGGTGATTCAAACCACGAGAGAAACATGTCATGAACTTCGGCCGCAGCTCCTCTATGATTTG
GGGTTAGTGAAGGCAATTTCGAAGCTGACTTCGCAAATTCAAGAGGAAGCGCCATTTCATATTAGGCTGAATACAACCCG
CTTTGATAAAGAATTGGACATTGATATTGACTCACAGCTGAATATTTACCGGATTGTGCAGGAGCTGTTATCCAATGCGT
TGAAGCATTCTAAGGCCAGCCAAGTCTTAGTGATGCTCATTTGTATTAAAGATCAAGTTGTTCTCCATTATGAGGACGAT
GGAGTCGGATTTGATGCTAGCCAGCTTGATCAGCACACGATGAGCATGGGTCTTTCTGGCATAAGGGAACGAGTCAAAGC
TCTAAATGGAAAGCTTCAAATTCACACAGCACCTGAAAAAGGGCTCAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

48.909

100

0.495