Detailed information NTG0091338

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: L6432_RS13030
• Genome accession: NZ_AP025339
• Coordinates: 2580328..2581485 (-)
• Length: 385 a.a.
• NCBI ID: WP_020453119.1
• Uniprot ID: A0A6I7TVP7
• Organism: Bacillus paralicheniformis strain J25TS1
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2575328..2586485

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L6432_RS13000	-	2575566..2575985 (-)	420	WP_020453114.1	TIGR03826 family flagellar region protein	-
L6432_RS13005	comFC	2576044..2576781 (-)	738	WP_026580174.1	ComF family protein	Machinery gene
L6432_RS13010	-	2576738..2577022 (-)	285	WP_020453116.1	late competence development ComFB family protein	-
L6432_RS13015	comFA	2577077..2578471 (-)	1395	WP_020453117.1	DEAD/DEAH box helicase	Machinery gene
L6432_RS13020	-	2578595..2579437 (-)	843	WP_020453118.1	DegV family protein	-
L6432_RS13025	degU	2579557..2580246 (-)	690	WP_003185730.1	two-component system response regulator DegU	Regulator
L6432_RS13030	degS	2580328..2581485 (-)	1158	WP_020453119.1	sensor histidine kinase	Regulator
L6432_RS13035	-	2581708..2582346 (+)	639	WP_023856394.1	YigZ family protein	-
L6432_RS13040	-	2582361..2583440 (+)	1080	WP_020453121.1	LCP family protein	-
L6432_RS13045	-	2583493..2583876 (-)	384	WP_020453122.1	YunG family protein	-
L6432_RS13050	-	2583985..2585049 (-)	1065	WP_020453123.1	glycosyltransferase family 4 protein	-
L6432_RS13055	tuaH	2585180..2586367 (-)	1188	WP_230631857.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44650.34 Da
• Isoelectric Point: 6.7862

>NTDB_id=91338 L6432_RS13030 WP_020453119.1 2580328..2581485(-) (degS) [Bacillus paralicheniformis strain J25TS1]
MSVSKMDSKVLDSIIMKMLKTVDGSKDEVFQIGEQSRQQYEGLVEELKQIKQQVNEVIDLGDRLEVHARHARNRLSEVSR
NFHKFSEEEIREAYEKAHKLQVELTMIQQREKQLREKRDDLERRLLGLQEIIERSEGLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDKGTEEGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEDYHGKAKIHFQCIGESEDRRIAPRFEVALFRLAQEAVTNALKHSESTEIHVKVEV
TKDFVTLIIKDNGNGFDLKEVKGKKNKSFGLLGMKERVDLLEGSMTIDSKIGLGTFILIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=91338 L6432_RS13030 WP_020453119.1 2580328..2581485(-) (degS) [Bacillus paralicheniformis strain J25TS1]
GTGAGTGTTTCCAAAATGGACTCCAAAGTTTTAGATTCAATCATTATGAAGATGTTAAAAACGGTTGATGGGAGCAAGGA
TGAGGTCTTTCAAATCGGAGAGCAGTCCCGTCAGCAATATGAAGGCTTGGTAGAAGAGCTGAAGCAGATTAAACAGCAGG
TCAACGAAGTCATCGATCTTGGAGACAGGCTGGAAGTGCATGCCCGCCATGCGCGAAACCGCTTGTCTGAGGTCAGCAGA
AACTTTCATAAATTCAGTGAAGAAGAGATTCGCGAAGCTTATGAAAAAGCCCACAAACTGCAGGTTGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGAGAGAGAAGCGTGATGATCTGGAACGGCGCCTTTTGGGGCTTCAGGAAATCATCGAGC
GTTCAGAAGGGCTTGTCAGCCAGATTACCGTCGTCTTAAACTATTTAAATCAGGATCTGCGCCAGGTTGGCGTTCTCCTA
GAAGATGCGCAGGCCAAACAGGATTTCGGACTGCGGATCATCGAAGCCCAAGAGGAAGAAAGAAAAAGGGTCTCAAGGGA
AATCCACGACGGCCCTGCGCAAATGCTGGCCAACGTCATGATGAGATCTGAGCTGATCGAACGCATCTTCAGAGACAAAG
GAACAGAAGAAGGCTTTCAGGAAATTAGAAACCTCCGGCAAAACGTCAGAAATGCTCTTTATGAAGTCAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGATTGATACCGACGCTCAGAAAATACTTGAACACGATCGAAGATTA
TCATGGAAAAGCAAAGATCCATTTCCAATGCATCGGAGAATCCGAAGATAGAAGAATAGCACCGCGGTTTGAGGTTGCAC
TTTTCCGGCTTGCACAGGAAGCAGTGACAAACGCCTTAAAACACTCCGAATCAACTGAGATTCATGTTAAAGTAGAAGTG
ACAAAAGATTTTGTGACGTTGATTATCAAAGACAATGGAAACGGCTTTGACTTAAAAGAAGTTAAAGGCAAGAAGAACAA
ATCTTTCGGTCTGCTAGGTATGAAAGAAAGAGTCGATTTGCTCGAAGGTTCAATGACAATCGATTCGAAAATAGGTCTTG
GGACATTTATTTTGATTAAAGTTCCGCTGTCTTTGTAA

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (292-384)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A0A6I7TVP7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	89.351	100	0.894