Detailed information NTG0912700

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: ABII15_RS13480
• Genome accession: NZ_CP159534
• Coordinates: 2923561..2924847 (-)
• Length: 428 a.a.
• NCBI ID: WP_353942552.1
• Uniprot ID: A0AAU8IR95
• Organism: Streptomyces sp. HUAS MG91
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2918561..2929847

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABII15_RS13465 (ABII15_13465)	-	2919147..2919698 (+)	552	WP_353942549.1	hypothetical protein	-
ABII15_RS13470 (ABII15_13470)	-	2919762..2922392 (-)	2631	WP_353942550.1	valine--tRNA ligase	-
ABII15_RS13475 (ABII15_13475)	-	2922508..2923485 (+)	978	WP_353942551.1	hypothetical protein	-
ABII15_RS13480 (ABII15_13480)	clpX	2923561..2924847 (-)	1287	WP_353942552.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
ABII15_RS13485 (ABII15_13485)	clpP	2925003..2925662 (-)	660	WP_018531452.1	ATP-dependent Clp protease proteolytic subunit	Regulator
ABII15_RS13490 (ABII15_13490)	clpP	2925721..2926326 (-)	606	WP_353947049.1	ATP-dependent Clp protease proteolytic subunit	Regulator
ABII15_RS13495 (ABII15_13495)	tig	2926639..2927997 (-)	1359	WP_353942553.1	trigger factor	-
ABII15_RS13510 (ABII15_13510)	-	2928665..2928859 (-)	195	WP_353942554.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46751.42 Da
• Isoelectric Point: 4.7828

>NTDB_id=912700 ABII15_RS13480 WP_353942552.1 2923561..2924847(-) (clpX) [Streptomyces sp. HUAS MG91]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGGSSRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIHSKRELEEKDQFQEVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRRTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADAVHSNVNPTLIPRDVRGGGSGEQKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=912700 ABII15_RS13480 WP_353942552.1 2923561..2924847(-) (clpX) [Streptomyces sp. HUAS MG91]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTCAAAAAGCTCAT
CGCAGGCCCCGGTGTATACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAGCTCGCGGAGACGA
GCGAAGTGCGCTGGGAAGAGCTTCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGCTACGTCGTGGGCCAGGAGGCC
GCCAAGAAGGCGCTCTCCGTGGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGGGAGAACGGCGGGGGCAGCAGCCG
TGACGACGCCATCGAACTGGCGAAGTCGAACATCCTGCTGCTCGGCCCGACCGGCTCCGGCAAGACGCTCCTCGCGCAGA
CGCTCGCGCGCATGCTGAACGTCCCGTTCGCGATCGCGGACGCCACGGCGCTCACCGAGGCGGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTCAAGATCCTGGAGGGCACCACTGCCTCCGTGCCCCCGCAGGGCGGCCGTAAGCATCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCGTTCGCCGGTCTGGAGAAGATCATCGAGTCGCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCACTCCAAGCGCGAGCTGGAGGAGAAGGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATTCCCGAGTTCATCGGCCGTCTCCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCGTCGAGCCGCGCAACGCACTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCCGCACCGGTGCGCGAGGTCTGC
GGGCCATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGTGTCGTCATCACG
GCGGACGCCGTCCACTCGAACGTGAACCCGACGCTGATCCCGCGCGATGTGCGGGGCGGCGGCAGCGGGGAGCAGAAGTC
GGCCTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

3D structure

• AlphaFold DB: A0AAU8IR95

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.925	0.598
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.237	96.495	0.523