Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   U0N78_RS03650 Genome accession   NZ_CP140109
Coordinates   739218..740222 (+) Length   334 a.a.
NCBI ID   WP_002935813.1    Uniprot ID   A0A0K2E7G3
Organism   Streptococcus suis strain 2022WUSS148     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 734218..745222
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U0N78_RS03625 (U0N78_03625) - 734227..735012 (+) 786 WP_029173686.1 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC -
  U0N78_RS03630 (U0N78_03630) - 735005..735823 (+) 819 WP_014636433.1 PTS system mannose/fructose/sorbose family transporter subunit IID -
  U0N78_RS03635 (U0N78_03635) - 735836..736252 (+) 417 WP_024382209.1 PTS sugar transporter subunit IIA -
  U0N78_RS03640 (U0N78_03640) - 736360..737616 (-) 1257 WP_197315129.1 ISL3 family transposase -
  U0N78_RS03645 (U0N78_03645) - 737930..739009 (-) 1080 WP_256769081.1 M24 family metallopeptidase -
  U0N78_RS03650 (U0N78_03650) ccpA 739218..740222 (+) 1005 WP_002935813.1 catabolite control protein A Regulator
  U0N78_RS03655 (U0N78_03655) - 740635..742959 (-) 2325 WP_322471678.1 Spy0128 family protein -
  U0N78_RS03660 (U0N78_03660) - 743259..744257 (+) 999 WP_105127739.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 36772.94 Da        Isoelectric Point: 5.5173

>NTDB_id=912575 U0N78_RS03650 WP_002935813.1 739218..740222(+) (ccpA) [Streptococcus suis strain 2022WUSS148]
MLNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYF
ATLAKGIDDIADMYKYNIVLANSDENDEKEINVVNTLFSKQVDGIIFMGYHLTDKIRAEFSRSRTPIVLAGTVDLEHQLP
SVNIDYAAASVDAVNLLAKNNKKIAFVSGPLVDDINGKVRFAGYKQGLKDNGIEFNEGLVFESKYKYEEGYALAERILNA
GATAAYVAEDEIAAGLLNGVSDMGVKVPEDFEIITSDDSLVTKFTRPNLTSINQPLYDIGAIAMRMLTKIMHKEELENRE
VVLNHGIKVRKSTK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=912575 U0N78_RS03650 WP_002935813.1 739218..740222(+) (ccpA) [Streptococcus suis strain 2022WUSS148]
ATGTTAAACACTGATGATACGGTTACGATTTACGATGTCGCCCGTGAAGCAGGTGTATCCATGGCGACAGTATCGCGCGT
GGTAAATGGGAATAAAAACGTAAAGGAAAATACTCGTAAAAAAGTATTAGAAGTCATCGACCGCTTGGATTATCGTCCAA
ATGCTGTTGCGCGTGGCTTGGCCAGCAAGAAGACTACCACTGTGGGGGTTGTGATTCCAAATATTGCTAACGCTTATTTT
GCAACCTTGGCCAAAGGTATCGATGATATTGCCGATATGTACAAATACAATATCGTCCTAGCAAACAGTGATGAAAATGA
TGAGAAAGAAATCAATGTGGTAAATACCCTATTCTCAAAACAGGTGGACGGAATCATTTTCATGGGCTATCATTTGACAG
ACAAGATTCGTGCGGAGTTTTCACGCTCACGTACCCCGATTGTTTTAGCTGGTACCGTGGACTTGGAGCACCAATTACCT
AGCGTCAATATTGACTATGCTGCTGCTAGTGTTGATGCAGTCAATCTATTAGCTAAGAACAACAAGAAAATTGCTTTTGT
ATCAGGGCCACTTGTAGATGACATCAACGGTAAAGTTCGTTTTGCAGGCTACAAACAAGGCTTGAAGGACAATGGAATCG
AGTTTAACGAAGGATTGGTTTTTGAATCCAAGTATAAATACGAGGAGGGCTACGCTCTAGCAGAACGTATTTTGAATGCC
GGAGCAACTGCAGCTTATGTTGCAGAAGATGAGATTGCTGCTGGTCTATTGAATGGTGTCAGTGATATGGGCGTCAAGGT
TCCAGAAGACTTTGAAATCATTACAAGTGATGATTCCCTAGTGACCAAGTTTACCCGTCCAAACCTGACCTCTATCAATC
AGCCACTATACGATATTGGTGCAATTGCTATGCGCATGCTTACCAAAATCATGCACAAGGAAGAGTTGGAAAACCGTGAG
GTAGTTCTTAACCACGGAATCAAAGTACGGAAATCAACTAAGTAA

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(176-333)

Bacterial regulatory proteins, lacI family (LacI)

(9-54)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0K2E7G3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

80.18

99.701

0.799
  ccpA Streptococcus gordonii str. Challis substr. CH1

79.58

99.701

0.793
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

59.215

99.102

0.587