Detailed information NTG0912366

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: U0040_RS15395
• Genome accession: NZ_CP140003
• Coordinates: 3107237..3108601 (+)
• Length: 454 a.a.
• NCBI ID: WP_373863447.1
• Uniprot ID: -
• Organism: Acinetobacter johnsonii strain HAMBI_0097
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 3102237..3113601

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U0040_RS15375 (U0040_15370)	thrC	3102447..3103586 (+)	1140	WP_004692833.1	threonine synthase	-
U0040_RS15380 (U0040_15375)	-	3103673..3104728 (-)	1056	WP_010325698.1	serine hydrolase	-
U0040_RS15385 (U0040_15380)	-	3104944..3105579 (+)	636	WP_004692836.1	response regulator	-
U0040_RS15390 (U0040_15385)	-	3105601..3107164 (+)	1564	Protein_2982	sensor histidine kinase	-
U0040_RS15395 (U0040_15390)	pilR	3107237..3108601 (+)	1365	WP_373863447.1	sigma-54-dependent transcriptional regulator	Regulator
U0040_RS15400 (U0040_15395)	-	3108606..3109781 (-)	1176	WP_114836625.1	S41 family peptidase	-
U0040_RS15405 (U0040_15400)	gpmI	3109800..3111347 (-)	1548	WP_114836626.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
U0040_RS15410 (U0040_15405)	lptG	3111471..3112541 (-)	1071	WP_004692843.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 454 a.a.
• Molecular weight: 51090.75 Da
• Isoelectric Point: 6.8691

>NTDB_id=912366 U0040_RS15395 WP_373863447.1 3107237..3108601(+) (pilR) [Acinetobacter johnsonii strain HAMBI_0097]
MQMSLSRMGIDTHIAYRLQEAVQALKTHQYDACLTDLNLPDGNGLSLVDFIAQNYPNLPVAVLTAYGNMDIAIAALKAGA
FDFVSKPINQKHLEQLLQKAFNQPISQLHIQEDTLEHRLLIGQSLPIQQLRITLKKIARSQAPVFITGESGTGKEVVANL
VHRLSNRNEGPFIAINCGAIPTELMDSELFGHRKGSFTGATQDKQGLILSAHGGSLFLDEIAELPLTMQVKLLRAVQEKR
IRPIGSDTEIDVDFRVISASHQDLEALVQQGKFRQDLYFRIHVMDIVLPALRERGNDILLLAQHFIQKICQEWDIPVKPL
SERAREFLLAQYYPGNVRELRNMMERAITLSDENSIDLPHLQTAPLRPIAQTNYANTTQQGTVGNDQLSHVPSRKLPEEG
LELYLEKIEKEILMNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDGEDDSV

Nucleotide

• Length: 1365 bp

>NTDB_id=912366 U0040_RS15395 WP_373863447.1 3107237..3108601(+) (pilR) [Acinetobacter johnsonii strain HAMBI_0097]
ATGCAAATGTCTTTAAGTCGGATGGGGATTGATACACATATTGCCTATCGCTTACAAGAGGCGGTTCAAGCCCTGAAAAC
GCATCAATATGATGCCTGTCTAACCGATCTGAATTTACCCGATGGTAATGGCCTGAGCTTGGTCGATTTTATTGCTCAAA
ATTATCCTAATTTACCCGTTGCTGTGCTGACGGCTTACGGCAATATGGATATTGCGATTGCAGCACTTAAAGCTGGTGCT
TTTGATTTTGTCAGCAAACCGATCAACCAAAAACATTTAGAGCAACTTTTACAAAAAGCTTTTAATCAGCCGATCAGTCA
GCTGCATATCCAAGAAGATACGCTTGAACATCGTCTGCTGATTGGTCAGTCCCTTCCAATTCAGCAACTACGCATCACCT
TAAAGAAAATTGCACGCTCGCAAGCCCCTGTCTTTATTACGGGTGAATCAGGCACGGGCAAAGAAGTGGTGGCTAATCTG
GTACATCGCCTGAGCAATCGCAATGAAGGACCATTTATTGCCATCAACTGCGGTGCCATACCGACTGAACTGATGGACAG
TGAATTGTTTGGACACCGTAAGGGGAGCTTTACAGGGGCGACTCAAGACAAACAAGGGCTGATTCTGTCTGCGCATGGCG
GCAGTTTATTTTTAGATGAAATTGCTGAGTTACCGCTCACTATGCAGGTGAAACTGCTGCGCGCGGTACAAGAAAAACGC
ATTCGCCCAATTGGGAGTGACACCGAAATTGATGTCGATTTCCGTGTGATTAGTGCCAGCCATCAAGACCTAGAAGCACT
TGTACAACAAGGCAAGTTCCGTCAGGATTTGTACTTCCGCATCCATGTCATGGACATTGTGCTGCCTGCCCTACGTGAGC
GTGGCAATGACATTCTTCTTTTAGCACAACATTTCATTCAGAAAATCTGCCAAGAATGGGACATCCCAGTCAAACCATTG
AGTGAACGTGCACGTGAGTTTTTATTGGCCCAATATTATCCAGGCAATGTGCGTGAATTACGCAATATGATGGAACGTGC
CATCACTTTAAGTGATGAAAACAGTATCGACTTACCGCACTTGCAAACAGCTCCACTGCGACCCATTGCTCAGACCAACT
ATGCCAATACCACGCAACAAGGTACTGTTGGCAATGATCAACTCAGTCATGTGCCTTCGCGTAAATTGCCCGAAGAGGGT
TTAGAGCTATATTTAGAAAAAATTGAAAAAGAAATTTTGATGAATGCGCTCAATCTCACCCATTGGAACCGAACACTAGC
GGCTAAAAAGCTCGGCATGTCTTTCCGTTCTTTACGTTATCGCTTGAAGAAATTCGGACTAGATGGCGAAGACGATTCCG
TTTAG

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (120-286)

• Bacterial regulatory protein, Fis family (HTH_8) (405-445)

• Response regulator receiver domain (Response_reg) (4-97)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	74.67	100	0.747
pilR	Pseudomonas aeruginosa PAK	48.78	99.339	0.485