Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   U0040_RS05690 Genome accession   NZ_CP140003
Coordinates   1152679..1153386 (-) Length   235 a.a.
NCBI ID   WP_004696183.1    Uniprot ID   A0A7H8SJ59
Organism   Acinetobacter johnsonii strain HAMBI_0097     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1147679..1158386
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U0040_RS05670 (U0040_05670) - 1148530..1149849 (+) 1320 WP_114836827.1 adenylosuccinate synthase -
  U0040_RS05675 (U0040_05675) - 1150050..1150355 (+) 306 WP_004696180.1 hypothetical protein -
  U0040_RS05680 (U0040_05680) - 1150542..1151315 (+) 774 WP_004982314.1 M48 family metallopeptidase -
  U0040_RS05685 (U0040_05685) - 1151441..1152490 (-) 1050 WP_078388958.1 NADP(H)-dependent aldo-keto reductase -
  U0040_RS05690 (U0040_05690) crp 1152679..1153386 (-) 708 WP_004696183.1 cAMP-activated global transcriptional regulator CRP Regulator
  U0040_RS05695 (U0040_05695) - 1153534..1153956 (+) 423 WP_004982311.1 OsmC family protein -
  U0040_RS05700 (U0040_05700) clpB 1154347..1156926 (+) 2580 WP_114836826.1 ATP-dependent chaperone ClpB -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 26414.97 Da        Isoelectric Point: 4.6788

>NTDB_id=912344 U0040_RS05690 WP_004696183.1 1152679..1153386(-) (crp) [Acinetobacter johnsonii strain HAMBI_0097]
MTSSFSQLSTDALSPGQLPESVKALLKRAYINRYPKRTTIVDAGSESKSLYLILKGSVSIILREDDEREIVVAYLNAGDF
FGEMGLFEANSQRTAEVRTRDVCEIAEVTYENFHELSKQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEEQGMIETDGKAILIFDASLEESKANADDYEDEE

Nucleotide


Download         Length: 708 bp        

>NTDB_id=912344 U0040_RS05690 WP_004696183.1 1152679..1153386(-) (crp) [Acinetobacter johnsonii strain HAMBI_0097]
ATGACTTCAAGCTTTTCACAATTAAGCACTGATGCGCTGTCTCCAGGTCAACTCCCCGAGTCAGTCAAAGCATTATTAAA
ACGCGCATATATTAATCGTTATCCTAAGCGTACAACCATCGTAGATGCAGGCTCAGAATCTAAATCTTTATATTTGATTT
TAAAAGGTTCGGTCTCCATTATTCTGCGTGAAGACGATGAACGTGAAATCGTAGTCGCTTATTTAAATGCGGGTGATTTT
TTTGGGGAAATGGGTCTATTCGAAGCAAACTCACAACGTACTGCAGAAGTGCGTACCCGTGATGTCTGCGAAATTGCTGA
AGTGACTTATGAAAACTTCCATGAGCTCAGCAAACAATACCCTGACCTGAGCTATGCAGTATTTGCACAGCTGGTACGCC
GTCTAAAAAATACCACTCGCAAAGTGACTGACCTTGCATTTATCGATGTTTCAGGTCGTATTGCACGTTGCCTAATCGAC
CTATCTTCGCAACCTGAAGCGATGATTTTACCAAATGGCCGCCAAATTCGTATTACGCGTCAAGAGATTGGACGTATTGT
CGGTTGTTCACGTGAAATGGTTGGTCGTGTTTTAAAAACACTCGAAGAGCAAGGCATGATCGAAACTGATGGTAAAGCCA
TCTTAATTTTCGATGCCTCTTTAGAAGAGTCAAAAGCGAATGCTGATGACTATGAAGACGAAGAATAA

Domains

Predicted by InterproScan.

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)

Bacterial regulatory proteins, crp family (Crp)

(176-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H8SJ59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

91.064

100

0.911
  crp Vibrio cholerae strain A1552

46.602

87.66

0.409
  crp Haemophilus influenzae Rd KW20

48.205

82.979

0.4