Detailed information NTG0091199

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AABK07_RS12975
• Genome accession: NZ_AP027869
• Coordinates: 2682702..2683727 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 2018-01-1CC
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2677702..2688727

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABK07_RS12955 (VEE71_24660)	metJ	2678763..2679080 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
AABK07_RS12960 (VEE71_24670)	yiiX	2679264..2679872 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
AABK07_RS12965 (VEE71_24680)	rpmE	2679933..2680145 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AABK07_RS12970 (VEE71_24690)	priA	2680348..2682546 (+)	2199	WP_001424430.1	primosomal protein N'	Machinery gene
AABK07_RS12975 (VEE71_24700)	cytR	2682702..2683727 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AABK07_RS12980 (VEE71_24710)	ftsN	2683819..2684778 (+)	960	WP_000068828.1	cell division protein FtsN	-
AABK07_RS12985 (VEE71_24720)	hslV	2684871..2685401 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AABK07_RS12990 (VEE71_24730)	hslU	2685411..2686742 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AABK07_RS12995 (VEE71_24740)	menA	2686809..2687735 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AABK07_RS13000 (VEE71_24750)	rraA	2687828..2688313 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AABK07_RS13005 (VEE71_24760)	zapB	2688398..2688643 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=91199 AABK07_RS12975 WP_000644904.1 2682702..2683727(+) (cytR) [Escherichia coli strain 2018-01-1CC]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=91199 AABK07_RS12975 WP_000644904.1 2682702..2683727(+) (cytR) [Escherichia coli strain 2018-01-1CC]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628