Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   U0544_RS00945 Genome accession   NZ_CP139944
Coordinates   78013..78396 (-) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter pittii strain CARB128     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 73013..83396
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U0544_RS00905 (U0544_00905) - 73247..74128 (+) 882 WP_005072800.1 DUF1853 family protein -
  U0544_RS00910 (U0544_00910) - 74252..74395 (+) 144 WP_014207555.1 entericidin A/B family lipoprotein -
  U0544_RS00915 (U0544_00915) dapE 74522..75658 (+) 1137 WP_005072799.1 succinyl-diaminopimelate desuccinylase -
  U0544_RS00920 (U0544_00920) - 75693..76160 (-) 468 WP_002116250.1 hypothetical protein -
  U0544_RS00925 (U0544_00925) - 76160..76384 (-) 225 Protein_97 response regulator -
  U0544_RS00930 (U0544_00930) - 76386..76988 (-) 603 Protein_98 chemotaxis protein -
  U0544_RS00935 (U0544_00935) pilI 77031..77567 (-) 537 WP_002116439.1 chemotaxis protein CheW -
  U0544_RS00940 (U0544_00940) pilH 77628..77990 (-) 363 WP_002116220.1 response regulator -
  U0544_RS00945 (U0544_00945) pilG 78013..78396 (-) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  U0544_RS00950 (U0544_00950) - 78681..79319 (+) 639 WP_005072790.1 hypothetical protein -
  U0544_RS00955 (U0544_00955) nolF 79389..80498 (+) 1110 WP_078210303.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=911894 U0544_RS00945 WP_000389061.1 78013..78396(-) (pilG) [Acinetobacter pittii strain CARB128]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=911894 U0544_RS00945 WP_000389061.1 78013..78396(-) (pilG) [Acinetobacter pittii strain CARB128]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTGATTGATGACTCAAAAACCATTCGCCGTACAGCGGAAACCTTATT
ACAGCGTGAAGGCTGTGAAGTGATTACTGCTGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAAGCAAATCCGGATA
TTGTTTTTGTCGATATCATGATGCCTCGTTTAGATGGTTATCAAACTTGTGCTTTGATAAAAAACTCTCAAAATTATCAG
AATATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGTTAAACGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37