Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   ABNQ24_RS04035 Genome accession   NZ_CP158968
Coordinates   826625..827125 (-) Length   166 a.a.
NCBI ID   WP_011002677.1    Uniprot ID   Q8XVQ9
Organism   Ralstonia pseudosolanacearum strain EN1     
Function   facilitate localization of RecA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 821625..832125
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABNQ24_RS04015 (ABNQ24_04005) - 822162..823304 (+) 1143 WP_016723760.1 pectate lyase -
  ABNQ24_RS04020 (ABNQ24_04010) corA 823342..824304 (-) 963 WP_011002681.1 magnesium/cobalt transporter CorA -
  ABNQ24_RS04025 (ABNQ24_04015) pyrF 824524..825339 (+) 816 WP_028853640.1 orotidine-5'-phosphate decarboxylase -
  ABNQ24_RS04030 (ABNQ24_04020) - 825374..826291 (+) 918 WP_223259716.1 cation diffusion facilitator family transporter -
  ABNQ24_RS04035 (ABNQ24_04025) cinA 826625..827125 (-) 501 WP_011002677.1 CinA family protein Machinery gene
  ABNQ24_RS04040 (ABNQ24_04030) - 827150..827728 (-) 579 WP_016723757.1 phosphatidylglycerophosphatase A -
  ABNQ24_RS04045 (ABNQ24_04035) thiL 827725..828723 (-) 999 WP_020832689.1 thiamine-phosphate kinase -
  ABNQ24_RS04050 (ABNQ24_04040) - 828966..831311 (+) 2346 WP_011002674.1 NADP-dependent malic enzyme -

Sequence

Protein


Download         Length: 166 a.a.        Molecular weight: 17466.92 Da        Isoelectric Point: 6.9696

>NTDB_id=910497 ABNQ24_RS04035 WP_011002677.1 826625..827125(-) (cinA) [Ralstonia pseudosolanacearum strain EN1]
MAESRALAQLAELVGDTLHKRSLMVATAESCTAGLVGAAITDIPGASAWFERGFVTYSNEAKSQMLGVPATLIREHGAVS
EPVAHAMAEGAVLNSRAQVALAVTGVAGPTGGTPDKPVGMVCFGWSNRLQTRVETRHFKGDRKQIRLQAAEHALRGLLDF
LDAAES

Nucleotide


Download         Length: 501 bp        

>NTDB_id=910497 ABNQ24_RS04035 WP_011002677.1 826625..827125(-) (cinA) [Ralstonia pseudosolanacearum strain EN1]
ATGGCTGAATCCCGCGCGCTGGCGCAACTGGCCGAACTGGTGGGCGACACGCTGCACAAGCGCAGTCTGATGGTGGCGAC
GGCGGAATCGTGCACCGCCGGGCTCGTCGGCGCGGCCATCACCGACATCCCGGGCGCGTCCGCGTGGTTCGAGCGCGGCT
TCGTCACGTATTCGAACGAAGCGAAATCGCAGATGCTGGGCGTGCCGGCCACGCTGATCCGCGAGCATGGCGCGGTGAGC
GAGCCGGTGGCGCACGCCATGGCCGAAGGCGCCGTGCTCAACAGCCGCGCACAGGTGGCGCTGGCCGTGACGGGCGTGGC
GGGACCGACCGGCGGCACACCCGACAAACCCGTCGGCATGGTGTGCTTCGGCTGGAGCAACCGCCTGCAGACGCGGGTGG
AAACCCGCCACTTCAAGGGCGACCGCAAGCAGATCCGGCTACAGGCCGCCGAGCATGCGCTGCGCGGCCTGCTGGACTTC
CTAGACGCCGCGGAAAGCTAG

Domains

Predicted by InterProScan.

Competence-damaged protein (CinA)

(9-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8XVQ9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Streptococcus pneumoniae R36A

40.816

88.554

0.361
  cinA Streptococcus pneumoniae Rx1

40.816

88.554

0.361
  cinA Streptococcus pneumoniae R6

40.816

88.554

0.361
  cinA Streptococcus pneumoniae D39

40.816

88.554

0.361