NTDB

Overview

Name	recG	Type	Machinery gene
Locus tag	ABOX98_RS31800	Genome accession	NZ_CP158570
Coordinates	6695029..6697104 (+)	Length	691 a.a.
NCBI ID	WP_031686235.1	Uniprot ID	-
Organism	Pseudomonas aeruginosa strain SRPA1308
Function	homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 6690029..6702104

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABOX98_RS31770 (ABOX98_31770)	-	6690451..6690831 (+)	381	WP_003096609.1	RidA family protein	-
ABOX98_RS31775 (ABOX98_31775)	-	6690886..6691617 (+)	732	WP_003096611.1	hypothetical protein	-
ABOX98_RS31780 (ABOX98_31780)	-	6691624..6692244 (-)	621	WP_003096613.1	LysE family translocator	-
ABOX98_RS31785 (ABOX98_31785)	-	6692311..6693111 (-)	801	WP_003096615.1	AraC family transcriptional regulator	-
ABOX98_RS31790 (ABOX98_31790)	-	6693111..6693962 (-)	852	WP_003096618.1	SDR family oxidoreductase	-
ABOX98_RS31795 (ABOX98_31795)	oxyR	6694100..6695032 (+)	933	WP_003096622.1	oxidative stress transcriptional regulator OxyR	-
ABOX98_RS31800 (ABOX98_31800)	recG	6695029..6697104 (+)	2076	WP_031686235.1	ATP-dependent DNA helicase RecG	Machinery gene
ABOX98_RS31805 (ABOX98_31805)	-	6697194..6698603 (+)	1410	WP_003136268.1	HDOD domain-containing protein	-
ABOX98_RS31810 (ABOX98_31810)	-	6698675..6699067 (-)	393	WP_003096629.1	hypothetical protein	-
ABOX98_RS31815 (ABOX98_31815)	-	6699203..6699475 (-)	273	WP_003096630.1	HU family DNA-binding protein	-
ABOX98_RS31820 (ABOX98_31820)	alkT	6699677..6700831 (-)	1155	WP_003114369.1	rubredoxin-NAD(+) reductase AlkT	-
ABOX98_RS31825 (ABOX98_31825)	-	6700883..6701050 (-)	168	WP_003098329.1	rubredoxin	-
ABOX98_RS31830 (ABOX98_31830)	-	6701234..6701401 (-)	168	WP_003098330.1	rubredoxin	-
ABOX98_RS31835 (ABOX98_31835)	-	6701535..6701936 (-)	402	WP_003096637.1	heme-binding protein	-

Sequence

Protein

Download Length: 691 a.a. Molecular weight: 76106.81 Da Isoelectric Point: 7.4218

                                >NTDB_id=910304 ABOX98_RS31800 WP_031686235.1 6695029..6697104(+) (recG) [Pseudomonas aeruginosa strain SRPA1308]

MTELSRVPVTALKGVGAALAEKLARVGLETLQDILFHLPLRYQDRTRVTAIGALRPGADAVVEGVVAGADVVMGRRRSLL

VRLQDGSGTLSLRFYHFSQAQKDGLKRGTHLRCYGEVRPGASGLEIYHPEYRALNGDEPIPVEQTLTPIYPTTEGLTQQR

LRQLSQQALAMLGPSSLPDWLPAELARDYQLGPLDQAIRYLHRPPPDADIEELAGGRHWAQLRLAFEELLTHQLSLQRLR

EAVRSQAAPRLPAASRLPKRFLANLGFQPTGAQRRVGAEIAYDLAQDEPMLRLVQGDVGAGKTVVAALAALQAIEAGYQV

ALMAPTEILAEQHFLNFSKWLQPLDIEVAWLAGKLKGKARAAALERIGDGAPMVVGTHALFQDEVKFKRLALAIIDEQHR

FGVQQRLALRQKGVDGRLCPHQLIMTATPIPRTLAMSAYADLDTSILDELPPGRTPVNTVLVADSRRIEVIERVRAACRE

GRQAYWVCTLIEESEELTCQAAETTYEELSSALGELRVGLIHGRMKPADKAVVMEAFKEGMLQLLVATTVIEVGVDVPNA

SLMIIENPERLGLAQLHQLRGRVGRGSAASHCVLLYHPPLSQIGRERLGIMRETSDGFVIAEKDLELRGPGEMLGTRQTG

LLQFKVADLMRDADLLPAVRDAAQSLLAHWPQHVSPLLERWLRHGQQYGQV

Nucleotide

Download Length: 2076 bp

                                >NTDB_id=910304 ABOX98_RS31800 WP_031686235.1 6695029..6697104(+) (recG) [Pseudomonas aeruginosa strain SRPA1308]

ATGACCGAGCTGTCCAGGGTCCCGGTCACCGCGCTAAAGGGCGTAGGCGCCGCGCTGGCGGAGAAGCTCGCTCGGGTAGG

CCTGGAAACCCTGCAGGACATCCTGTTCCACCTGCCCCTGCGCTACCAGGACCGTACCCGCGTCACCGCCATCGGCGCCC

TGCGGCCAGGGGCCGACGCGGTGGTCGAGGGCGTGGTGGCCGGCGCCGACGTGGTGATGGGGCGCCGCCGCAGCCTGCTG

GTGCGCCTGCAGGACGGCAGCGGCACCCTGAGCCTGCGCTTCTACCATTTCAGCCAGGCGCAGAAGGACGGTCTCAAGCG

CGGCACCCACCTGCGCTGCTACGGCGAAGTCCGGCCGGGCGCCTCGGGCCTGGAGATCTACCATCCGGAATACCGCGCGC

TGAACGGCGACGAGCCGATTCCGGTGGAGCAGACCCTGACGCCGATCTACCCGACTACCGAAGGACTCACCCAGCAGCGC

CTGCGCCAGTTGAGCCAACAGGCCCTGGCCATGCTCGGTCCCAGCAGCCTGCCCGACTGGCTGCCGGCGGAACTGGCCCG

CGATTACCAACTTGGCCCGCTCGACCAGGCGATCCGCTACCTGCACCGGCCGCCGCCGGATGCCGACATCGAGGAACTGG

CCGGAGGCCGGCACTGGGCGCAGTTGCGCCTGGCCTTCGAAGAACTGCTGACCCACCAGTTATCCCTGCAGCGCCTGCGC

GAAGCCGTGCGTTCGCAGGCAGCGCCGCGCTTGCCGGCGGCCAGCCGCTTGCCGAAACGCTTCCTTGCCAACCTCGGCTT

CCAGCCAACCGGCGCGCAACGCCGGGTCGGCGCGGAGATCGCCTACGACCTGGCCCAGGACGAACCGATGCTGCGCCTGG

TGCAAGGCGACGTCGGCGCCGGCAAGACCGTGGTCGCCGCCCTCGCCGCCCTGCAAGCCATAGAGGCCGGCTACCAGGTG

GCGCTGATGGCGCCGACCGAGATCCTCGCCGAGCAGCATTTCCTCAACTTCAGCAAGTGGCTCCAGCCGCTGGACATCGA

AGTCGCCTGGCTGGCCGGCAAGCTCAAGGGCAAGGCCCGCGCGGCGGCACTGGAACGCATCGGCGACGGCGCGCCGATGG

TGGTCGGCACCCACGCGCTGTTCCAGGATGAAGTGAAATTCAAGCGCCTTGCACTGGCGATCATCGACGAACAGCACCGC

TTCGGCGTGCAGCAGCGCCTGGCCCTGCGCCAGAAGGGCGTGGACGGCAGGCTCTGCCCGCACCAGTTGATCATGACCGC

CACGCCGATCCCGCGGACCCTGGCGATGAGCGCCTATGCCGACCTCGACACCTCGATCCTCGACGAGCTGCCGCCCGGGC

GTACCCCGGTGAATACCGTGCTGGTGGCCGACAGCCGCCGTATCGAGGTGATCGAGCGAGTCCGCGCGGCTTGCCGCGAA

GGGCGCCAGGCCTACTGGGTGTGTACCCTGATCGAAGAGTCCGAGGAGCTTACCTGCCAGGCCGCCGAGACCACCTACGA

AGAGCTTTCCTCGGCGCTGGGCGAACTGCGTGTCGGCCTGATCCACGGGCGCATGAAGCCGGCGGACAAGGCCGTGGTAA

TGGAGGCCTTCAAGGAAGGCATGTTGCAACTGCTGGTGGCGACCACGGTGATCGAGGTCGGCGTCGACGTGCCCAACGCC

AGCCTGATGATCATCGAGAACCCCGAGCGCCTTGGCCTGGCCCAACTGCACCAGCTACGCGGCCGGGTTGGCCGGGGCAG

CGCCGCCAGCCACTGCGTGCTGCTCTACCACCCACCGCTGTCGCAGATCGGCCGCGAGCGGCTGGGCATCATGCGCGAAA

CCAGCGACGGCTTCGTCATCGCCGAGAAGGACCTGGAATTGCGCGGCCCCGGCGAAATGCTCGGCACCCGCCAGACCGGC

CTGCTGCAATTCAAGGTCGCCGACCTGATGCGCGACGCAGACCTGCTGCCGGCGGTCCGCGATGCCGCCCAATCCCTCCT

GGCGCACTGGCCGCAGCATGTCAGCCCGCTGCTCGAACGGTGGTTGCGCCACGGCCAGCAATACGGTCAAGTGTGA

Domains

Predicted by InterProScan.

DEAD/DEAH box helicase (DEAD)

(293-430)

Helicase conserved C-terminal domain (Helicase_C)

(479-586)

RecG wedge domain (RecG_wedge)

(12-170)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(614-675)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
recG	Neisseria meningitidis strain C311	50.373	97.106	0.489
recG	Bacillus subtilis subsp. subtilis str. 168	40.208	97.54	0.392
recG/mmsA	Streptococcus pneumoniae R6	40.569	96.671	0.392
recG/mmsA	Streptococcus pneumoniae R36A	40.569	96.671	0.392

Detailed information NTG0910304