Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   SD437_RS15725 Genome accession   NZ_CP139565
Coordinates   3114484..3116784 (-) Length   766 a.a.
NCBI ID   WP_345912442.1    Uniprot ID   -
Organism   Bacillus velezensis strain NCCP     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3109484..3121784
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SD437_RS15685 - 3109944..3110375 (+) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -
  SD437_RS15690 - 3110375..3110716 (+) 342 WP_022553706.1 Na(+)/H(+) antiporter subunit C -
  SD437_RS15695 - 3110709..3112190 (+) 1482 WP_021495363.1 Na+/H+ antiporter subunit D -
  SD437_RS15700 - 3112196..3112672 (+) 477 WP_017419419.1 Na+/H+ antiporter subunit E -
  SD437_RS15705 - 3112672..3112956 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  SD437_RS15710 mnhG 3112940..3113314 (+) 375 WP_252052749.1 monovalent cation/H(+) antiporter subunit G -
  SD437_RS15715 - 3113354..3113737 (-) 384 WP_017419422.1 hotdog fold thioesterase -
  SD437_RS15720 comA 3113759..3114403 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  SD437_RS15725 comP 3114484..3116784 (-) 2301 WP_345912442.1 histidine kinase Regulator
  SD437_RS15730 comX 3116798..3116971 (-) 174 WP_345912443.1 competence pheromone ComX -
  SD437_RS15735 - 3116940..3117800 (-) 861 WP_157774448.1 polyprenyl synthetase family protein -
  SD437_RS15740 degQ 3118008..3118148 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  SD437_RS15745 - 3118613..3118954 (+) 342 WP_014418765.1 hypothetical protein -
  SD437_RS15750 - 3118961..3120184 (-) 1224 WP_014418766.1 EAL and HDOD domain-containing protein -
  SD437_RS15755 - 3120314..3121780 (-) 1467 WP_106067969.1 nicotinate phosphoribosyltransferase -

Sequence

Protein


Download         Length: 766 a.a.        Molecular weight: 88353.61 Da        Isoelectric Point: 7.4131

>NTDB_id=910242 SD437_RS15725 WP_345912442.1 3114484..3116784(-) (comP) [Bacillus velezensis strain NCCP]
MKLSKNTYSILLILLSLSYIFYLTYINVNNLFVGATANVNNKNQIEITKVSDYTMAYYAGVKKGDIVIKINQNKSVEPKD
LKQNTLKNVRSMTVERSGEIVDLKNLSLLSEDNLFVYLIPVIFFFVCLSCIILILKINKEQDSVSAFILIIFLLTTGIAY
VSAGGSSKGDIISRYVNVITLISVPVNYLLFIYQYIKEFGYKIFNGKVFVALYTVPVINIILEFFRHCFERGVVGKVNLV
SISLLYLIALFFITVGLIKYKKTERANILKTFLLINIFAFSPFVFLYVAPYIIFNDYYVSSFLVAPFLLLIPFSLVYQFM
TNKIYEIDFIIGRLKYYSLLAVTPTLLIITIYDLVQDPNSEFYTFKLTLLTYIIMLAVFYSKEILDFRFRLKRFSEKHNY
QDSIFKFTQIIKGASSLKQVFTELESTLLEVLMVSKVCVLEVEGDLNVRYFFNDNEKKLWEPYSHQLAETTSEIGKIVQV
DKGFLMKIGERGTKSYIVLCLSFMNTPKLTWDEISWLKTLSFYTSITMENVLKIEELMNHLEDLKKQETNPVWLKKLMFT
IEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCHIEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLGL
VKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVGC
NQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2301 bp        

>NTDB_id=910242 SD437_RS15725 WP_345912442.1 3114484..3116784(-) (comP) [Bacillus velezensis strain NCCP]
ATGAAGTTATCTAAAAATACGTATTCCATTTTATTAATTTTACTCAGCTTGTCTTATATTTTCTATTTAACTTATATAAA
TGTAAATAATTTATTTGTAGGAGCCACCGCAAATGTTAATAACAAGAATCAAATAGAGATTACCAAAGTATCAGATTACA
CAATGGCTTATTATGCTGGTGTTAAAAAAGGTGACATTGTAATTAAAATTAATCAGAATAAGAGCGTTGAACCAAAAGAT
TTAAAACAAAATACATTGAAAAACGTAAGATCTATGACAGTTGAAAGATCTGGTGAAATAGTTGATCTCAAAAATTTAAG
TTTATTAAGTGAAGACAACTTATTTGTTTATTTAATACCTGTTATTTTTTTCTTTGTATGCCTTAGTTGTATTATCCTTA
TTTTAAAAATTAATAAGGAGCAAGATTCAGTTTCAGCTTTTATATTGATCATCTTTTTACTCACTACTGGTATAGCATAT
GTAAGTGCGGGAGGTTCATCAAAAGGAGATATAATAAGCCGATACGTAAATGTCATAACTTTAATATCCGTACCGGTAAA
TTATCTCTTGTTTATTTACCAATATATCAAAGAATTTGGATACAAGATTTTTAACGGGAAAGTTTTTGTTGCTTTATATA
CAGTCCCTGTTATTAATATAATACTAGAGTTTTTTAGGCATTGCTTTGAAAGAGGAGTAGTGGGGAAAGTTAATCTAGTA
TCAATATCTCTCCTTTATTTAATAGCTCTATTTTTCATTACTGTAGGTTTAATAAAGTACAAAAAAACAGAGCGAGCAAA
TATTCTTAAGACTTTTCTTTTAATTAATATTTTTGCTTTCTCACCATTTGTATTTTTGTATGTGGCACCCTACATCATTT
TTAATGACTATTATGTTTCTTCTTTTTTAGTTGCGCCTTTTCTTTTATTAATTCCTTTTTCTTTAGTTTATCAATTTATG
ACTAATAAAATCTATGAAATTGATTTTATTATTGGGCGGTTGAAATATTATAGTCTTTTAGCTGTCACTCCTACTTTACT
TATTATTACAATTTATGATCTTGTACAAGATCCAAACTCAGAGTTTTATACGTTTAAACTAACTTTGCTGACATATATTA
TTATGTTGGCTGTGTTTTATTCAAAAGAGATCTTAGATTTTCGTTTCCGTTTAAAGCGTTTTTCTGAAAAACATAATTAT
CAGGACAGCATATTCAAGTTTACTCAAATAATTAAAGGAGCTTCATCCTTAAAGCAAGTATTCACTGAACTTGAATCTAC
TCTACTTGAAGTTTTGATGGTTAGTAAAGTATGTGTTTTAGAGGTAGAAGGAGACTTAAATGTAAGGTATTTTTTTAATG
ATAATGAGAAAAAATTATGGGAGCCGTATTCTCATCAATTAGCTGAAACGACAAGCGAAATTGGCAAGATAGTTCAGGTG
GATAAAGGGTTTTTAATGAAAATAGGGGAACGGGGCACTAAATCATACATTGTACTGTGTTTATCATTTATGAATACTCC
GAAACTAACTTGGGATGAGATTTCTTGGTTAAAAACCTTATCATTCTACACCAGTATTACGATGGAGAATGTGCTTAAAA
TCGAAGAACTTATGAATCATCTCGAAGATTTAAAGAAACAAGAGACAAACCCGGTCTGGCTCAAAAAGCTGATGTTTACG
ATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGATTTGATTTCTTTGAAGCGCCA
GTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAGGAGCCCTGCCACATAGAGGTGCAGGACAAGCTTCATCAGATGAATG
AGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGGCCTCAGCTGCTGTATGATTTGGGTCTG
GTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTTTAC
GGCGGCGCTGGATTTGGATACCCAGCTGAATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGAAGCATTCAC
AGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTCCATTATGAAGACGACGGTGTCGGCTGC
AATCAGGAAGAAGGCGGCGGACAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAACGCGTCCGTGCGCTTGACGGACG
GATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(566-635)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

56.471

99.869

0.564