Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   SM123_RS03495 Genome accession   NZ_CP139419
Coordinates   758099..759103 (+) Length   334 a.a.
NCBI ID   WP_061591300.1    Uniprot ID   A0A6L6LCJ5
Organism   Streptococcus lingualis strain S5     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 753099..764103
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SM123_RS03480 (SM123_03480) - 755213..756055 (+) 843 WP_061591427.1 metallophosphoesterase -
  SM123_RS03485 (SM123_03485) - 756167..756616 (+) 450 WP_320909830.1 Rrf2 family transcriptional regulator -
  SM123_RS03490 (SM123_03490) - 756856..757938 (-) 1083 WP_024055142.1 Xaa-Pro peptidase family protein -
  SM123_RS03495 (SM123_03495) ccpA 758099..759103 (+) 1005 WP_061591300.1 catabolite control protein A Regulator
  SM123_RS03500 (SM123_03500) - 759245..760243 (+) 999 WP_037599374.1 glycosyltransferase family 4 protein -
  SM123_RS03505 (SM123_03505) - 760245..761567 (+) 1323 WP_320909831.1 glycosyltransferase family 4 protein -
  SM123_RS03510 (SM123_03510) thrS 761921..763864 (+) 1944 WP_150906396.1 threonine--tRNA ligase -

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 37074.14 Da        Isoelectric Point: 6.7730

>NTDB_id=909527 SM123_RS03495 WP_061591300.1 758099..759103(+) (ccpA) [Streptococcus lingualis strain S5]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIERLDYRPNAVARGLASKKTTTVGVVIPNITNSYFS
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNNLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATVDAVAQLAKHNKKIAFVSGPLVDDINGKIRLAGYKEALKTKKLSYSEGLVFESKYRYDEGYNLAERIIASK
ATAAFVTGDELAAGLLNGLSDHGIKVPEDFEIITSDDSQVTRYTRPNLSTIGQPLYDLGAISMRMLTKIMHKEELEEREV
LLSHTINQRGTTKK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=909527 SM123_RS03495 WP_061591300.1 758099..759103(+) (ccpA) [Streptococcus lingualis strain S5]
ATGAATACAGACGATACAGTAACGATTTATGATGTCGCCCGTGAAGCAGGGGTTTCAATGGCAACCGTTAGTCGTGTAGT
GAATGGAAATAAGAACGTTAAAGAAAATACACGTAAAAAAGTTTTGGAAGTGATCGAACGCTTGGATTACCGTCCAAATG
CTGTTGCGCGTGGTCTTGCCAGCAAGAAAACCACAACGGTCGGTGTTGTGATTCCAAACATTACCAACAGCTATTTCTCT
ACCTTGGCTAAAGGGATTGATGACATTGCGGAAATGTACAAGTACAACATCGTCCTTGCAAATAGCGATGAAGACGATGA
CAAAGAAGTTTCAGTAGTAAACAACCTCTTTTCAAAACAAGTGGATGGAATCATTTTCATGGGCTATCACTTGACAGAAA
AGATTCGCTCAGAGTTTTCACGCTCTCGGACGCCAGTCGTCCTTGCTGGGACAGTCGATGTAGAACACCAATTACCAAGT
GTCAATATCGACTACAAGCAAGCGACAGTTGATGCTGTTGCACAATTGGCAAAACACAACAAGAAAATTGCTTTTGTAAG
TGGCCCATTGGTGGATGATATCAATGGAAAAATCCGTTTGGCGGGCTATAAAGAAGCTTTGAAAACGAAAAAATTGAGCT
ACAGCGAAGGACTTGTCTTTGAATCGAAATACCGTTATGATGAAGGTTACAACTTGGCAGAACGCATCATTGCGTCAAAA
GCAACAGCTGCTTTTGTGACAGGTGATGAATTGGCTGCAGGTCTCTTGAACGGCTTGTCTGATCACGGTATCAAAGTACC
AGAAGACTTTGAAATCATTACTAGTGATGATTCACAAGTAACACGTTACACGCGTCCAAATCTATCAACGATTGGCCAAC
CCTTGTATGACCTAGGTGCGATTAGTATGCGTATGTTGACCAAGATCATGCACAAAGAAGAGTTGGAAGAACGCGAAGTG
TTGTTGTCTCATACGATCAACCAACGTGGAACGACGAAAAAATAA

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(180-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6L6LCJ5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

90.719

100

0.907
  ccpA Streptococcus pneumoniae D39

85.03

100

0.85
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

56.495

99.102

0.56