Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   SM123_RS00850 Genome accession   NZ_CP139419
Coordinates   144118..144879 (-) Length   253 a.a.
NCBI ID   WP_049495811.1    Uniprot ID   A0A414PH70
Organism   Streptococcus lingualis strain S5     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 139118..149879
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SM123_RS00825 (SM123_00825) ychF 139165..140280 (-) 1116 WP_003010773.1 redox-regulated ATPase YchF -
  SM123_RS00830 (SM123_00830) - 140459..140956 (+) 498 WP_320909607.1 DUF1307 domain-containing protein -
  SM123_RS00835 (SM123_00835) - 140992..141183 (-) 192 WP_003002008.1 DUF951 domain-containing protein -
  SM123_RS00840 (SM123_00840) dnaN 141196..142332 (-) 1137 WP_070449649.1 DNA polymerase III subunit beta -
  SM123_RS00845 (SM123_00845) dnaA 142492..143850 (-) 1359 WP_070449645.1 chromosomal replication initiator protein DnaA -
  SM123_RS00850 (SM123_00850) spo0J 144118..144879 (-) 762 WP_049495811.1 ParB/RepB/Spo0J family partition protein Regulator
  SM123_RS00855 (SM123_00855) htrA 144951..146132 (-) 1182 WP_320909608.1 S1C family serine protease Regulator
  SM123_RS00860 (SM123_00860) rlmH 146337..146816 (+) 480 WP_003009233.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SM123_RS00870 (SM123_00870) - 147273..148613 (+) 1341 WP_214259682.1 GHKL domain-containing protein -
  SM123_RS00875 (SM123_00875) comE/comE2 148610..149368 (+) 759 WP_003009229.1 response regulator transcription factor Regulator

Sequence

Protein


Download         Length: 253 a.a.        Molecular weight: 29317.85 Da        Isoelectric Point: 9.7134

>NTDB_id=909514 SM123_RS00850 WP_049495811.1 144118..144879(-) (spo0J) [Streptococcus lingualis strain S5]
MEKLEKIAVKDIRTNPFQPRKVFDQEKLEELAQSIKENGLIQPIIVRKSPIIGFELLAGERRFRASKIAGLELVPAIIKE
LTDQEMMRQAIIENLQREDLNPIEEAISYQKLVDHGYKHDQIAQFMGKSRPYISNMLRLLHLAPSVQEAVIQNDISSAHA
RVLVPLDEEEQRFWLERIKQDHLNVRTLESKISSKRKQKNKKAKESFLLEEEQRLKKILGTDVTIHSSSQNKGTIQISFS
SLDEYQRIINSLK

Nucleotide


Download         Length: 762 bp        

>NTDB_id=909514 SM123_RS00850 WP_049495811.1 144118..144879(-) (spo0J) [Streptococcus lingualis strain S5]
ATGGAAAAATTAGAAAAAATAGCGGTAAAGGACATTCGAACCAATCCTTTCCAACCAAGAAAAGTATTTGATCAAGAAAA
ATTAGAAGAACTGGCTCAGTCAATCAAAGAAAATGGCTTAATTCAACCCATTATTGTCAGAAAATCTCCAATAATTGGTT
TTGAATTGCTTGCAGGTGAAAGACGGTTTAGAGCTTCAAAAATTGCTGGATTAGAGCTTGTTCCTGCGATTATTAAAGAG
TTAACGGATCAAGAAATGATGCGACAAGCCATTATTGAAAATCTTCAACGAGAAGATCTCAATCCAATTGAAGAAGCCAT
CTCCTACCAGAAGCTCGTTGATCATGGCTATAAGCACGACCAAATCGCTCAATTTATGGGGAAATCTAGACCCTATATCA
GCAATATGCTTCGCTTGTTACATCTAGCTCCCTCTGTTCAAGAAGCAGTCATTCAAAATGATATTTCTTCGGCTCATGCG
CGTGTTCTTGTTCCTCTTGATGAAGAAGAGCAGCGCTTTTGGTTGGAGCGAATCAAACAGGATCATTTAAATGTTCGAAC
ATTAGAAAGCAAGATCAGTTCAAAAAGAAAACAGAAAAATAAAAAAGCAAAAGAGAGCTTCCTACTGGAAGAGGAACAGC
GATTGAAAAAAATATTAGGAACAGATGTGACGATACACTCCTCTTCTCAAAATAAAGGAACTATCCAAATTTCTTTTTCC
AGTCTTGATGAATACCAACGAATTATCAACAGCCTTAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(144-193)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A414PH70

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

49.012

100

0.49