Detailed information NTG0090923

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: L6431_RS14610
• Genome accession: NZ_AP025273
• Coordinates: 3072460..3074685 (+)
• Length: 741 a.a.
• NCBI ID: WP_237044448.1
• Uniprot ID: -
• Organism: Aquipseudomonas alcaligenes strain MRCP2
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3067460..3079685

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L6431_RS14580	-	3067662..3067964 (-)	303	WP_237044445.1	phosphodiesterase	-
L6431_RS14585	-	3067961..3068533 (-)	573	WP_021700494.1	PilZ domain-containing protein	-
L6431_RS14590	-	3068632..3069882 (+)	1251	WP_021700493.1	lipoprotein-releasing ABC transporter permease subunit	-
L6431_RS14595	lolD	3069875..3070558 (+)	684	WP_061904710.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
L6431_RS14600	-	3070558..3071802 (+)	1245	WP_237044446.1	lipoprotein-releasing ABC transporter permease subunit	-
L6431_RS14605	-	3071837..3072364 (-)	528	WP_061904708.1	DUF2062 domain-containing protein	-
L6431_RS14610	comA	3072460..3074685 (+)	2226	WP_237044448.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
L6431_RS14615	-	3074758..3075429 (+)	672	WP_021700488.1	MotA/TolQ/ExbB proton channel family protein	-
L6431_RS14620	-	3075426..3075854 (+)	429	WP_021700487.1	ExbD/TolR family protein	-
L6431_RS14625	lpxK	3075851..3076855 (+)	1005	WP_237044449.1	tetraacyldisaccharide 4'-kinase	-
L6431_RS14630	-	3076895..3077080 (+)	186	WP_021700485.1	Trm112 family protein	-
L6431_RS14635	kdsB	3077081..3077845 (+)	765	WP_237044451.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
L6431_RS14640	-	3077845..3078309 (+)	465	WP_142137360.1	low molecular weight protein-tyrosine-phosphatase	-
L6431_RS14645	murB	3078306..3079325 (+)	1020	WP_237044453.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 80541.77 Da
• Isoelectric Point: 9.0593

>NTDB_id=90923 L6431_RS14610 WP_237044448.1 3072460..3074685(+) (comA) [Aquipseudomonas alcaligenes strain MRCP2]
MRTGMFALATGLACLPLLPQLPPTWLLLALLPLALMLLPWRSYPLALFTFGFIWACFSAQAALDDRLAVALDGRTLWLEG
RISGLPEVGEGVVRFQLEDAVAREQRLPQRLRLSWYDGPPVLAGERWRLAVKLKRPRGLVNPQGFDYEAWLLAQRIGATG
TIKAGERLQAAAGTAAWRDALRQELLAVEAFGRAGALAALVLGDDSGLSRADWRVLQDTGTVHLLVISGQHVALLAAVLY
ALVAGLARLGLWPRFLPWLPWACALAFAGALGYGLLAGFEVPVRRACVMVALVLLWRLRFRHLGLWWPLLLAFVLVLLVE
PLASLQAGFWLSFGAVAVLAWVFGGRLGAWSWWRVWWRAQWTLALGLLPLFFALGLPLSLSGPLANLLAVPWVSLLVVPL
ALLGTLLLPVPWLGEGLLWLAGGLLAILFQLLGWIASALPAWLPTAVPLWCWLLGSLGVLLCLLPAGVPLRALGLVLLLA
LLLPPRERIPAGQAQVWQLDVGQGLAVLVRTREHALLYDAGPRFGDFDLGERVVLPSLRQLGVDRLDLLMLSHADSDHAG
GAEAVLRGMTVARVASGEAGELPRALQAQPCVDGERWAWDGVVFTTWRWRDAPPGNAASCLLKVEAQGESLLLTGDVDAA
AEKALLASGRDLRASWLQVPHHGSRSSSSAAFLDAVAPHGALLSRGWHNPFGHPHPSVVARYHARGIALYDSAELGAIRL
QLGDVQGISAWREHPRLWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=90923 L6431_RS14610 WP_237044448.1 3072460..3074685(+) (comA) [Aquipseudomonas alcaligenes strain MRCP2]
ATGCGCACAGGGATGTTCGCGCTGGCCACAGGCCTGGCCTGTTTGCCGTTGCTGCCGCAGTTGCCGCCGACCTGGCTGTT
GCTGGCGCTCTTGCCGCTGGCGCTGATGCTGCTGCCCTGGCGCAGTTATCCGCTGGCCTTATTTACGTTCGGCTTCATCT
GGGCCTGTTTCAGCGCGCAGGCGGCGCTGGATGATCGCCTGGCCGTGGCGCTCGACGGCCGCACCCTGTGGCTGGAGGGA
CGGATCAGCGGGTTGCCGGAGGTGGGCGAGGGCGTGGTGCGTTTCCAGCTGGAAGACGCAGTGGCGCGTGAGCAGCGGCT
GCCACAGCGATTGCGTTTGTCCTGGTATGACGGTCCGCCGGTGCTGGCCGGCGAGCGCTGGCGCCTGGCGGTCAAGCTCA
AGCGCCCGCGTGGCCTGGTCAACCCGCAGGGCTTCGACTACGAAGCCTGGCTGCTGGCCCAGCGCATCGGCGCCACGGGC
ACGATCAAGGCCGGCGAGCGCCTGCAGGCGGCGGCGGGCACGGCCGCCTGGCGCGACGCGCTGCGCCAGGAGCTGCTCGC
GGTCGAGGCGTTCGGCCGCGCGGGTGCGCTGGCGGCACTGGTGCTGGGCGACGACTCCGGGCTCAGTCGCGCCGACTGGC
GCGTGCTGCAGGACACCGGCACGGTGCATCTACTGGTGATCTCCGGGCAGCATGTGGCGCTGCTGGCGGCGGTGCTCTAT
GCGCTGGTCGCCGGTCTGGCGCGGCTCGGCCTGTGGCCTCGATTTCTACCCTGGTTGCCCTGGGCTTGCGCGCTGGCCTT
CGCCGGCGCGCTGGGCTACGGGTTGCTGGCCGGCTTCGAGGTGCCGGTGCGGCGGGCCTGCGTGATGGTGGCCCTGGTGT
TGCTGTGGCGTTTGCGTTTTCGTCATCTGGGCCTGTGGTGGCCGTTGCTGCTGGCGTTCGTGCTGGTGCTGCTGGTCGAG
CCGCTGGCCAGCCTGCAGGCCGGGTTCTGGCTATCGTTCGGCGCGGTGGCGGTGCTGGCCTGGGTGTTTGGCGGGCGGCT
CGGGGCCTGGTCCTGGTGGCGCGTCTGGTGGCGTGCGCAGTGGACCCTGGCGCTGGGGCTGTTGCCGCTGTTCTTCGCGC
TGGGGTTGCCGCTGAGCCTGAGTGGGCCGCTGGCCAATCTGCTGGCCGTACCCTGGGTCAGTCTGCTGGTGGTGCCGCTG
GCGCTGCTCGGAACCCTGTTGCTGCCCGTGCCCTGGCTGGGTGAGGGCCTGCTGTGGCTGGCGGGTGGCCTGCTGGCGAT
CCTGTTCCAGCTGCTGGGCTGGATAGCCAGCGCGCTGCCGGCCTGGTTGCCCACCGCCGTGCCGCTCTGGTGCTGGCTGC
TCGGCAGCCTCGGTGTGTTGCTTTGCCTGCTGCCGGCGGGCGTGCCGCTGCGCGCGTTGGGGCTGGTGCTGTTGCTCGCC
CTGTTGCTACCGCCGCGCGAGCGCATTCCGGCGGGGCAGGCGCAGGTCTGGCAGCTGGATGTCGGTCAGGGCCTGGCCGT
GCTGGTGCGTACTCGCGAGCATGCGTTGCTGTACGACGCCGGTCCGCGCTTCGGCGACTTCGACCTAGGCGAGCGGGTGG
TGCTGCCCTCGCTGCGCCAGCTGGGTGTCGACCGACTCGACCTGCTAATGCTCAGCCATGCCGACAGCGATCATGCCGGC
GGCGCTGAGGCGGTGCTCCGGGGCATGACCGTAGCGCGGGTGGCAAGTGGCGAGGCGGGCGAGCTGCCGCGGGCGCTGCA
GGCGCAACCCTGCGTCGACGGTGAACGCTGGGCGTGGGATGGCGTGGTTTTCACCACCTGGCGTTGGCGTGATGCGCCGC
CGGGTAATGCCGCGTCCTGCCTGCTCAAGGTAGAGGCGCAGGGCGAGAGTCTGCTGCTCACCGGCGATGTGGATGCTGCC
GCGGAGAAGGCCCTGCTGGCGAGCGGTCGCGATTTGCGCGCTAGCTGGCTGCAGGTGCCACATCACGGCAGTCGCAGTTC
CTCCAGTGCGGCTTTTCTCGACGCCGTGGCGCCGCACGGCGCGCTGCTTTCGCGCGGTTGGCACAACCCGTTCGGCCATC
CTCACCCCAGTGTCGTTGCGCGCTATCACGCGCGCGGCATCGCCCTGTATGACAGCGCCGAGCTGGGCGCCATTCGGCTG
CAGCTGGGGGATGTGCAGGGTATTTCCGCCTGGCGCGAACACCCGCGCCTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (20-167)

• Competence protein (Competence) (200-464)

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-684)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	67.972	96.491	0.656
comA	Ralstonia pseudosolanacearum GMI1000	38.481	100	0.404