Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   SOI74_RS03685 Genome accession   NZ_CP139287
Coordinates   818427..818810 (-) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter pittii strain 564U     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 813427..823810
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SOI74_RS03670 (SOI74_03670) pilJ 815324..817402 (-) 2079 WP_182917801.1 methyl-accepting chemotaxis protein -
  SOI74_RS03675 (SOI74_03675) pilI 817445..817981 (-) 537 WP_002116439.1 chemotaxis protein CheW -
  SOI74_RS03680 (SOI74_03680) pilH 818042..818404 (-) 363 WP_002116220.1 response regulator -
  SOI74_RS03685 (SOI74_03685) pilG 818427..818810 (-) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  SOI74_RS03690 (SOI74_03690) - 819094..819732 (+) 639 WP_033850745.1 hypothetical protein -
  SOI74_RS03695 (SOI74_03695) nolF 819801..820910 (+) 1110 WP_080973437.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=908787 SOI74_RS03685 WP_000389061.1 818427..818810(-) (pilG) [Acinetobacter pittii strain 564U]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=908787 SOI74_RS03685 WP_000389061.1 818427..818810(-) (pilG) [Acinetobacter pittii strain 564U]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTGATTGATGACTCAAAAACCATTCGCCGTACAGCAGAAACCTTATT
ACAGCGCGAAGGCTGTGAAGTCATTACTGCTGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAAGCAAATCCGGATA
TTGTTTTTGTCGATATCATGATGCCTCGTTTAGATGGTTATCAAACTTGTGCTTTGATAAAAAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGTTAAACGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37