Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   SOI81_RS03130 Genome accession   NZ_CP139286
Coordinates   644885..645268 (+) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter pittii strain AbaK     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 639885..650268
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SOI81_RS03120 (SOI81_03120) nolF 642784..643893 (-) 1110 WP_320541566.1 efflux RND transporter periplasmic adaptor subunit -
  SOI81_RS03125 (SOI81_03125) - 643962..644600 (-) 639 WP_320541228.1 hypothetical protein -
  SOI81_RS03130 (SOI81_03130) pilG 644885..645268 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  SOI81_RS03135 (SOI81_03135) pilH 645291..645653 (+) 363 WP_000101096.1 response regulator -
  SOI81_RS03140 (SOI81_03140) pilI 645714..646250 (+) 537 WP_016143130.1 chemotaxis protein CheW -
  SOI81_RS03145 (SOI81_03145) pilJ 646293..648371 (+) 2079 WP_016143131.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=908753 SOI81_RS03130 WP_000389061.1 644885..645268(+) (pilG) [Acinetobacter pittii strain AbaK]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=908753 SOI81_RS03130 WP_000389061.1 644885..645268(+) (pilG) [Acinetobacter pittii strain AbaK]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTGATTGATGACTCAAAAACCATTCGCCGTACAGCAGAAACTTTATT
GCAGCGCGAAGGCTGTGAAGTCATTACTGCTGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAAGCAAATCCGGATA
TTGTTTTTGTCGATATCATGATGCCTCGTTTAGATGGTTATCAAACTTGTGCTTTGATAAAAAACTCTCAAAATTATCAG
AACATTCCCGTTATTATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGTTAAACGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37