Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | SOI80_RS01835 | Genome accession | NZ_CP139270 |
| Coordinates | 387876..388436 (+) | Length | 186 a.a. |
| NCBI ID | WP_078219781.1 | Uniprot ID | - |
| Organism | Acinetobacter pittii strain HCG62 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 382876..393436
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SOI80_RS01810 (SOI80_01810) | - | 384992..385147 (-) | 156 | WP_014207816.1 | hypothetical protein | - |
| SOI80_RS01815 (SOI80_01815) | rpoZ | 385186..385464 (-) | 279 | WP_002116990.1 | DNA-directed RNA polymerase subunit omega | - |
| SOI80_RS01820 (SOI80_01820) | gmk | 385537..386166 (-) | 630 | WP_005804544.1 | guanylate kinase | - |
| SOI80_RS01825 (SOI80_01825) | ispH | 386289..387239 (+) | 951 | WP_032006348.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| SOI80_RS01830 (SOI80_01830) | fimU | 387409..387882 (+) | 474 | WP_005067119.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| SOI80_RS01835 (SOI80_01835) | pilV | 387876..388436 (+) | 561 | WP_078219781.1 | type IV pilus modification protein PilV | Machinery gene |
| SOI80_RS01840 (SOI80_01840) | pilW | 388436..389437 (+) | 1002 | WP_017481717.1 | PilW family protein | Machinery gene |
| SOI80_RS01845 (SOI80_01845) | pilX | 389434..390243 (+) | 810 | WP_017481716.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 186 a.a. Molecular weight: 19853.88 Da Isoelectric Point: 7.9110
>NTDB_id=908556 SOI80_RS01835 WP_078219781.1 387876..388436(+) (pilV) [Acinetobacter pittii strain HCG62]
MLMQGSKQKAQVGVGLLEVLVALILIAIGVLGYVALQVRAMDASSEALSKSQAIMIMRGLAENIRVNSSQASQYPAFVRS
YSNYSSTTAAPTLCFNAACTPSQLAQFDAYQAARNADQLGMKITMTNCPGVTSTMAQQRQCLFVFWGKTAPVITTNEGVT
SADVSSCMSTNGVYVNNSNCLMMEAY
MLMQGSKQKAQVGVGLLEVLVALILIAIGVLGYVALQVRAMDASSEALSKSQAIMIMRGLAENIRVNSSQASQYPAFVRS
YSNYSSTTAAPTLCFNAACTPSQLAQFDAYQAARNADQLGMKITMTNCPGVTSTMAQQRQCLFVFWGKTAPVITTNEGVT
SADVSSCMSTNGVYVNNSNCLMMEAY
Nucleotide
Download Length: 561 bp
>NTDB_id=908556 SOI80_RS01835 WP_078219781.1 387876..388436(+) (pilV) [Acinetobacter pittii strain HCG62]
ATGTTAATGCAGGGCTCTAAACAAAAGGCTCAAGTTGGGGTGGGTTTATTAGAAGTGTTGGTTGCCTTAATTTTAATTGC
GATAGGGGTTTTAGGATATGTTGCCTTGCAAGTCCGTGCTATGGATGCTTCTTCAGAGGCATTAAGCAAATCTCAAGCGA
TTATGATCATGAGAGGATTAGCAGAAAACATTCGCGTAAATAGTTCTCAAGCTAGTCAGTATCCCGCATTTGTCCGTAGT
TATAGCAATTATTCATCTACCACCGCAGCTCCTACGTTGTGTTTCAATGCAGCTTGTACACCTTCTCAGCTTGCCCAATT
TGATGCATATCAAGCAGCAAGAAATGCTGATCAACTTGGCATGAAAATTACAATGACAAATTGCCCAGGGGTTACAAGCA
CAATGGCCCAGCAGAGGCAATGTTTGTTTGTTTTTTGGGGAAAAACCGCTCCAGTAATTACAACAAATGAGGGAGTCACG
AGCGCGGATGTGTCGAGCTGTATGAGTACAAATGGCGTTTATGTCAATAATTCGAACTGTTTAATGATGGAGGCATATTA
A
ATGTTAATGCAGGGCTCTAAACAAAAGGCTCAAGTTGGGGTGGGTTTATTAGAAGTGTTGGTTGCCTTAATTTTAATTGC
GATAGGGGTTTTAGGATATGTTGCCTTGCAAGTCCGTGCTATGGATGCTTCTTCAGAGGCATTAAGCAAATCTCAAGCGA
TTATGATCATGAGAGGATTAGCAGAAAACATTCGCGTAAATAGTTCTCAAGCTAGTCAGTATCCCGCATTTGTCCGTAGT
TATAGCAATTATTCATCTACCACCGCAGCTCCTACGTTGTGTTTCAATGCAGCTTGTACACCTTCTCAGCTTGCCCAATT
TGATGCATATCAAGCAGCAAGAAATGCTGATCAACTTGGCATGAAAATTACAATGACAAATTGCCCAGGGGTTACAAGCA
CAATGGCCCAGCAGAGGCAATGTTTGTTTGTTTTTTGGGGAAAAACCGCTCCAGTAATTACAACAAATGAGGGAGTCACG
AGCGCGGATGTGTCGAGCTGTATGAGTACAAATGGCGTTTATGTCAATAATTCGAACTGTTTAATGATGGAGGCATATTA
A
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Acinetobacter baumannii D1279779 |
84.409 |
100 |
0.844 |