Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   SOI79_RS11050 Genome accession   NZ_CP139266
Coordinates   2287941..2288324 (+) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter pittii strain HUM14     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2282941..2293324
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SOI79_RS11040 (SOI79_11040) nolF 2285840..2286949 (-) 1110 WP_080776822.1 efflux RND transporter periplasmic adaptor subunit -
  SOI79_RS11045 (SOI79_11045) - 2287018..2287656 (-) 639 WP_017400247.1 hypothetical protein -
  SOI79_RS11050 (SOI79_11050) pilG 2287941..2288324 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  SOI79_RS11055 (SOI79_11055) pilH 2288347..2288709 (+) 363 WP_002116220.1 response regulator -
  SOI79_RS11060 (SOI79_11060) pilI 2288770..2289306 (+) 537 WP_002116439.1 chemotaxis protein CheW -
  SOI79_RS11065 (SOI79_11065) pilJ 2289349..2291427 (+) 2079 WP_032036912.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=908541 SOI79_RS11050 WP_000389061.1 2287941..2288324(+) (pilG) [Acinetobacter pittii strain HUM14]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=908541 SOI79_RS11050 WP_000389061.1 2287941..2288324(+) (pilG) [Acinetobacter pittii strain HUM14]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTGATTGATGACTCAAAAACCATTCGCCGTACAGCAGAAACCTTATT
ACAGCGTGAAGGCTGTGAAGTTATTACTGCTGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAAGCAAATCCGGATA
TTGTTTTTGTCGATATCATGATGCCTCGTTTAGATGGTTATCAAACTTGTGCTTTGATAAAAAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGTTAAACGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37