Detailed information NTG0908535

Bioinformatically predicted

Overview

• Name: pilY1
• Type: Machinery gene
• Locus tag: SOI79_RS09435
• Genome accession: NZ_CP139266
• Coordinates: 1970850..1974704 (+)
• Length: 1284 a.a.
• NCBI ID: WP_057061736.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain HUM14
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1965850..1979704

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SOI79_RS09405 (SOI79_09405)	gmk	1966132..1966761 (-)	630	WP_002116973.1	guanylate kinase	-
SOI79_RS09410 (SOI79_09410)	ispH	1966884..1967834 (+)	951	WP_002116992.1	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	-
SOI79_RS09415 (SOI79_09415)	fimU	1968004..1968477 (+)	474	WP_005067119.1	Tfp pilus assembly protein FimT/FimU	Machinery gene
SOI79_RS09420 (SOI79_09420)	pilV	1968471..1969031 (+)	561	WP_081037637.1	type IV pilus modification protein PilV	Machinery gene
SOI79_RS09425 (SOI79_09425)	pilW	1969031..1970032 (+)	1002	WP_057061737.1	PilW family protein	Machinery gene
SOI79_RS09430 (SOI79_09430)	pilX	1970029..1970838 (+)	810	WP_017481716.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene
SOI79_RS09435 (SOI79_09435)	pilY1	1970850..1974704 (+)	3855	WP_057061736.1	PilC/PilY family type IV pilus protein	Machinery gene
SOI79_RS09440 (SOI79_09440)	pilY2	1974715..1975197 (+)	483	WP_057061734.1	type IV pilin protein	Machinery gene
SOI79_RS09445 (SOI79_09445)	pilE	1975194..1975619 (+)	426	WP_002117055.1	type IV pilin protein	Machinery gene
SOI79_RS09450 (SOI79_09450)	rpsP	1975767..1976018 (+)	252	WP_000260334.1	30S ribosomal protein S16	-
SOI79_RS09455 (SOI79_09455)	rimM	1976038..1976586 (+)	549	WP_002116736.1	ribosome maturation factor RimM	-
SOI79_RS09460 (SOI79_09460)	trmD	1976629..1977384 (+)	756	WP_002116964.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
SOI79_RS09465 (SOI79_09465)	rplS	1977604..1977972 (+)	369	WP_002116654.1	50S ribosomal protein L19	-
SOI79_RS09470 (SOI79_09470)	lip	1978025..1978966 (-)	942	WP_081037636.1	lipase family alpha/beta hydrolase	-

Sequence

Protein

• Length: 1284 a.a.
• Molecular weight: 137706.23 Da
• Isoelectric Point: 7.5995

>NTDB_id=908535 SOI79_RS09435 WP_057061736.1 1970850..1974704(+) (pilY1) [Acinetobacter pittii strain HUM14]
MKLKLKNFKPNNLWYAICSSSVAFTWLMTSSVVQASDLQIYASPTAGKKTIVMMLDTSGSMTNNSYGENRLAMLKNGMNA
FLASNNPVLNDTRVGLGNFSANGDSRSGQVLVAAAPLGDASTLNTVGSQRYKLKQAVANLTAGGSTPSAHAYAEAAAYLM
GTTTYSEANYAIRKDSYIKRVRKSDNRTEYSYCTNYRDSQIDTTNLWQPCRSNSYWSNWSTSNPGVDTATAYDTSSDWTY
SYTYYYTTFNYAVANADSGIPKSKSNDTTSNPNIVVDRNASNLNAIYQSPLPAVTNRQSCDGQGIYFLSDGEPNNTTNTR
SATVMSTALGSTLGANFTCSGGLSNTTADSGWACMGEFAKRLFDKTKNPAGVSIQTAFVGFGSDFSSLSSSDVKNACRLS
SRTQSDRKGDDACSPNQTTNAVAAPGYGNGGFFPTQSAQGVTDSVIAFINNLEKVPLQPLTTGAISVPYDALNPKNLQEY
GYLRALEPNPANTYLTWRGNLKKYHVVLSGGNAGAFEANTGGLVYNASGAFRTGTKDYWNSSNYNDGGNVFLGGSYAKVP
LPIAGQNETRDEDGNIIKYYYAVQTKIRNLFTDVSAVAADGSLTKISTSGTNLLKIPAAPPEGTNPFDSVANTASYVLGK
FNASTGQDILKAFPIGLKLKILNYLGYSTDISATTLPSSLVTSNEPYLSMGGSIHSLPVQLTYNGTLDENGNLTSAREQS
ILYGTMEGGLHLVDASTGVEQMAFVPADILNDPIASKALVVGQSDASAPAHGMDGAWVSDPAYSITTTGSGSSAVSKVTA
KQMNIYGGMRMGGSSYYGLNVLNPVSPKLLFRVGADQTDYSRMGQSWSKPVLANIRYNGVIKRVMIVGGGYDQCYENPNI
TLSNSCFTNGKAKGNAVYIIDAKTGERLWWTSDTGSNIDNSNMKHSIVSRISTLDRDADGLVDHLYFGDLGGQIFRIDLN
NNQTKTNSTYSSFGIRVVRLANLATNDSTYDASNDYTAGNAPRFYEPPTVTIHDYGIRTFITVGIASGDRSTPLDVYPLT
GREGMSPSTALSGRPVNNVYGIIDKDFIKKNLMSLADNQLETKDITRLTLRKNPQILRSGETRVAQIFFPNTGVGQSGWY
RSLSSMSDGTEKANNSFRIKGGLKAFEEPMAVTGTLIVPVYDPQGTGIVAADPCLPRVVGETDQQTFCLPFGACLNSDGS
IDQNKENGSGFKTQTGTNCPVGASECNKNVIGSGIRGVTFVPTEDNPPATNSCGKLKLSGNESGTGEWQCTSHLVPARWY
ERYR

Nucleotide

• Length: 3855 bp

>NTDB_id=908535 SOI79_RS09435 WP_057061736.1 1970850..1974704(+) (pilY1) [Acinetobacter pittii strain HUM14]
GTGAAACTAAAATTGAAGAATTTTAAGCCAAATAATTTATGGTATGCCATCTGTTCGAGTTCAGTTGCTTTTACATGGCT
AATGACAAGCTCCGTTGTGCAGGCGAGTGATTTACAAATTTATGCTTCACCTACAGCTGGTAAAAAAACTATTGTGATGA
TGTTGGATACATCAGGAAGTATGACCAACAATAGTTATGGCGAAAACCGTCTGGCCATGCTTAAAAATGGTATGAATGCT
TTTTTAGCAAGTAATAATCCTGTTTTAAATGACACTCGTGTGGGGTTGGGAAATTTCTCTGCAAATGGTGATAGCCGAAG
TGGGCAGGTTTTAGTGGCTGCTGCTCCTTTAGGAGATGCGAGTACGTTAAATACAGTGGGTTCTCAACGTTATAAATTAA
AACAGGCTGTTGCAAATTTAACTGCTGGCGGGTCAACGCCTTCAGCACATGCTTATGCGGAAGCTGCTGCTTATTTGATG
GGTACAACGACCTATTCAGAGGCGAATTATGCTATCCGAAAAGATAGCTATATAAAGCGTGTGCGAAAATCTGATAATAG
AACGGAATACTCATATTGTACGAATTATCGCGATTCACAAATCGATACCACAAATCTATGGCAACCTTGTCGCTCTAATA
GCTATTGGAGTAACTGGTCAACTTCTAATCCGGGTGTGGATACGGCAACTGCTTATGATACTTCGTCGGATTGGACCTAT
TCTTATACTTATTACTACACCACCTTTAATTATGCTGTAGCAAATGCAGATAGTGGTATCCCAAAATCAAAATCAAACGA
TACAACCAGCAATCCCAATATTGTTGTAGATAGAAATGCCTCTAATTTAAATGCTATTTACCAATCTCCTTTACCTGCGG
TGACCAATCGCCAGAGTTGTGATGGGCAAGGAATCTACTTTTTATCAGATGGGGAGCCGAACAATACAACAAATACGCGT
TCTGCAACTGTCATGTCGACAGCCCTAGGCAGCACTTTGGGAGCAAATTTTACTTGTTCTGGAGGTTTGTCTAACACTAC
AGCAGACTCTGGTTGGGCCTGTATGGGGGAATTTGCAAAAAGATTATTTGATAAAACAAAAAACCCAGCTGGGGTTTCTA
TTCAAACAGCATTTGTCGGTTTTGGTAGTGACTTTTCTAGTTTAAGTTCTTCTGATGTAAAAAATGCCTGTCGTTTAAGT
TCGAGAACCCAATCTGACCGAAAAGGAGATGATGCGTGTTCACCGAATCAGACCACAAATGCGGTCGCTGCACCTGGTTA
TGGGAATGGAGGTTTTTTCCCTACCCAAAGTGCGCAAGGTGTAACAGACAGTGTTATCGCATTTATTAATAACTTAGAAA
AAGTTCCGTTACAACCCTTAACCACTGGCGCTATCTCAGTTCCTTATGATGCACTAAACCCTAAAAATTTACAGGAATAT
GGTTACTTACGGGCTTTAGAGCCAAACCCAGCTAACACCTACTTAACATGGCGTGGAAATTTAAAGAAATATCATGTTGT
TTTATCAGGGGGCAATGCAGGTGCTTTTGAAGCTAACACTGGTGGGTTGGTTTACAATGCAAGTGGGGCTTTTAGAACGG
GTACGAAAGATTATTGGAATAGCTCTAATTATAATGATGGAGGTAACGTCTTTTTAGGTGGTTCATATGCAAAAGTTCCT
TTACCAATTGCTGGACAAAATGAAACACGTGATGAAGATGGAAATATCATAAAATATTATTACGCAGTACAAACTAAAAT
CCGCAACTTATTTACTGATGTTTCCGCTGTTGCGGCAGATGGTAGCTTAACGAAAATATCGACTTCTGGAACTAATTTGC
TAAAAATCCCAGCTGCTCCCCCAGAAGGAACTAATCCTTTTGATAGTGTGGCTAATACAGCAAGTTATGTTTTAGGAAAA
TTTAATGCATCAACTGGACAAGATATTTTAAAAGCTTTCCCGATTGGCTTGAAATTAAAAATATTAAATTATCTAGGTTA
CTCAACTGATATTAGCGCTACGACTTTACCTTCGTCATTAGTTACATCGAATGAACCCTATTTATCGATGGGCGGTAGTA
TTCATTCTTTACCGGTGCAGCTTACCTATAATGGAACATTAGATGAAAATGGGAATTTAACATCTGCGCGTGAACAATCC
ATTCTCTATGGAACGATGGAAGGTGGTCTGCATCTTGTGGATGCTTCAACTGGCGTAGAACAAATGGCTTTCGTTCCGGC
TGATATATTAAATGATCCAATTGCATCAAAAGCTTTAGTGGTTGGCCAAAGTGATGCCTCAGCTCCTGCTCACGGTATGG
ATGGGGCTTGGGTATCTGACCCTGCATATAGTATTACTACAACGGGAAGCGGTAGCTCAGCAGTATCAAAAGTAACTGCA
AAGCAAATGAATATTTATGGTGGCATGCGAATGGGTGGCAGCAGCTATTATGGCTTAAATGTCTTAAATCCTGTCTCACC
TAAGCTCCTGTTTAGAGTAGGAGCAGATCAAACTGATTATAGTCGCATGGGGCAGAGTTGGTCTAAACCTGTACTTGCAA
ATATACGTTATAACGGAGTTATTAAACGGGTTATGATTGTTGGTGGTGGCTACGACCAATGTTATGAAAACCCGAATATT
ACCTTGAGTAATTCTTGCTTTACGAATGGAAAAGCAAAAGGGAATGCTGTTTATATTATTGATGCTAAAACTGGGGAACG
CTTATGGTGGACTAGTGATACAGGCTCTAATATAGATAACTCTAATATGAAGCACAGTATTGTTAGTCGCATTAGTACCT
TAGATCGAGATGCTGATGGTTTGGTAGACCATTTATATTTTGGCGATTTAGGCGGGCAAATTTTCCGTATCGATCTTAAT
AATAACCAGACAAAAACAAATTCAACTTATAGCAGTTTCGGTATTCGAGTTGTTCGATTAGCGAATTTAGCAACAAATGA
CTCAACTTATGATGCTTCGAATGACTATACCGCTGGGAATGCGCCGCGTTTTTATGAACCGCCAACAGTGACAATTCATG
ATTATGGAATCCGCACTTTTATTACTGTAGGTATTGCTTCAGGTGACCGTAGTACACCTTTAGATGTTTATCCGCTTACA
GGTCGTGAGGGGATGTCACCGAGCACCGCATTAAGCGGAAGACCTGTAAACAATGTCTATGGGATTATCGATAAAGACTT
TATCAAAAAGAATTTAATGTCTTTAGCTGATAACCAACTTGAAACAAAAGATATTACTCGATTGACGCTTCGAAAAAATC
CACAAATTTTACGATCCGGAGAAACACGAGTAGCACAGATTTTCTTTCCAAACACTGGGGTGGGGCAAAGTGGTTGGTAT
CGCTCACTTTCTAGTATGAGCGATGGCACAGAGAAAGCTAATAATAGTTTCCGTATTAAAGGTGGACTGAAAGCTTTTGA
AGAACCTATGGCCGTTACGGGGACTTTAATTGTGCCTGTTTATGATCCGCAGGGAACAGGCATTGTAGCGGCAGACCCAT
GTTTACCACGTGTAGTAGGTGAAACTGACCAGCAGACGTTCTGTTTACCATTTGGCGCCTGCCTTAATTCTGATGGGTCA
ATTGATCAAAATAAAGAGAATGGAAGTGGATTCAAAACACAAACTGGTACTAATTGCCCAGTAGGAGCTTCCGAATGTAA
TAAAAACGTTATTGGCTCCGGTATTCGTGGCGTAACATTTGTACCAACGGAGGATAACCCACCTGCGACTAATAGTTGTG
GGAAATTAAAGCTGTCTGGAAACGAGAGTGGAACGGGCGAGTGGCAATGTACAAGTCACTTAGTTCCTGCGCGCTGGTAT
GAGCGTTATCGCTAA

Domains

Predicted by InterproScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (714-965)

• von Willebrand factor type A domain (VWA_2) (51-161)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY1	Acinetobacter baumannii D1279779	84.884	100	0.853