Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | SOI73_RS17390 | Genome accession | NZ_CP139262 |
| Coordinates | 3644532..3645014 (+) | Length | 160 a.a. |
| NCBI ID | WP_002116770.1 | Uniprot ID | A0A009RUX0 |
| Organism | Acinetobacter pittii strain HUM1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3639532..3650014
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SOI73_RS17380 (SOI73_17380) | pilX | 3639846..3640655 (+) | 810 | WP_002117088.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| SOI73_RS17385 (SOI73_17385) | pilY1 | 3640667..3644521 (+) | 3855 | WP_002116849.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| SOI73_RS17390 (SOI73_17390) | pilY2 | 3644532..3645014 (+) | 483 | WP_002116770.1 | type IV pilin protein | Machinery gene |
| SOI73_RS17395 (SOI73_17395) | pilE | 3645011..3645436 (+) | 426 | WP_002117055.1 | type IV pilin protein | Machinery gene |
| SOI73_RS17400 (SOI73_17400) | rpsP | 3645584..3645835 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| SOI73_RS17405 (SOI73_17405) | rimM | 3645855..3646403 (+) | 549 | WP_002116736.1 | ribosome maturation factor RimM | - |
| SOI73_RS17410 (SOI73_17410) | trmD | 3646446..3647201 (+) | 756 | WP_002116964.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| SOI73_RS17415 (SOI73_17415) | rplS | 3647421..3647789 (+) | 369 | WP_002116654.1 | 50S ribosomal protein L19 | - |
| SOI73_RS17420 (SOI73_17420) | lip | 3647841..3648782 (-) | 942 | WP_014207808.1 | lipase family alpha/beta hydrolase | - |
| SOI73_RS17425 (SOI73_17425) | - | 3648898..3649929 (-) | 1032 | WP_019767421.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17520.76 Da Isoelectric Point: 8.4721
>NTDB_id=908496 SOI73_RS17390 WP_002116770.1 3644532..3645014(+) (pilY2) [Acinetobacter pittii strain HUM1]
MNKYYIQRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKGEILKLAEQLERHKSKNFTYRGFTTTSVTLP
RGGYTIEISDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGAVTCNVCETNSENWQ
MNKYYIQRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKGEILKLAEQLERHKSKNFTYRGFTTTSVTLP
RGGYTIEISDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGAVTCNVCETNSENWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=908496 SOI73_RS17390 WP_002116770.1 3644532..3645014(+) (pilY2) [Acinetobacter pittii strain HUM1]
ATGAATAAATACTATATCCAACGGTTTAATCAGGGTGTTACCTTGATTGAGCTCATGGTTGTCATCGTGATTGTCGCTAT
TTTTGCTTCGATTGCTATCCCTTCATATCAAAGTTATAGCCGCAGAGCGACTGCCTCTGCTGCTAAAGGTGAAATTCTAA
AATTGGCAGAACAGTTGGAACGGCATAAATCCAAGAACTTTACCTATAGAGGATTTACTACGACATCTGTAACTTTGCCA
CGGGGTGGTTATACGATTGAAATTAGTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAGAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAATTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGCCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAGCAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
ATGAATAAATACTATATCCAACGGTTTAATCAGGGTGTTACCTTGATTGAGCTCATGGTTGTCATCGTGATTGTCGCTAT
TTTTGCTTCGATTGCTATCCCTTCATATCAAAGTTATAGCCGCAGAGCGACTGCCTCTGCTGCTAAAGGTGAAATTCTAA
AATTGGCAGAACAGTTGGAACGGCATAAATCCAAGAACTTTACCTATAGAGGATTTACTACGACATCTGTAACTTTGCCA
CGGGGTGGTTATACGATTGAAATTAGTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAGAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAATTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGCCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAGCAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
93.75 |
100 |
0.938 |
| comE | Acinetobacter baylyi ADP1 |
40.678 |
100 |
0.45 |