Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   SOI70_RS13730 Genome accession   NZ_CP139258
Coordinates   2852873..2853277 (-) Length   134 a.a.
NCBI ID   WP_005079001.1    Uniprot ID   A0A022J074
Organism   Acinetobacter pittii strain HUM3     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2847873..2858277
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SOI70_RS13700 (SOI70_13720) - 2847957..2848226 (-) 270 WP_000567533.1 HPr family phosphocarrier protein -
  SOI70_RS13705 (SOI70_13725) rapZ 2848223..2849074 (-) 852 WP_002117179.1 RNase adapter RapZ -
  SOI70_RS13710 (SOI70_13730) panC 2849098..2849946 (-) 849 WP_002117191.1 pantoate--beta-alanine ligase -
  SOI70_RS13715 (SOI70_13735) panB 2849950..2850759 (-) 810 WP_002117298.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  SOI70_RS13720 (SOI70_13740) folK 2850805..2851287 (-) 483 WP_005078999.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  SOI70_RS13725 (SOI70_13745) pcnB 2851284..2852747 (-) 1464 WP_005079000.1 polynucleotide adenylyltransferase PcnB -
  SOI70_RS13730 (SOI70_13750) comEA 2852873..2853277 (-) 405 WP_005079001.1 ComEA family DNA-binding protein Machinery gene
  SOI70_RS13735 (SOI70_13755) mazG 2853246..2854052 (-) 807 WP_005079002.1 nucleoside triphosphate pyrophosphohydrolase -
  SOI70_RS13740 (SOI70_13760) - 2854165..2854938 (+) 774 WP_005079004.1 SDR family oxidoreductase -
  SOI70_RS13745 (SOI70_13765) relA 2854985..2857291 (-) 2307 WP_002117181.1 RelA/SpoT family protein -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 15484.79 Da        Isoelectric Point: 10.5869

>NTDB_id=908437 SOI70_RS13730 WP_005079001.1 2852873..2853277(-) (comEA) [Acinetobacter pittii strain HUM3]
MQLSMNLWKNKHNIFIILFWSLISSTSVQAQSFDQNFKEWKAKQQRYDQKLSMQHSSHSNSPKSSVMTDLSGQIHLNQAN
IDELQKLKGIGEKKAQAIVEYRQKNGGFKNIDEFKNVKGIGPAIFEKNKMRLTL

Nucleotide


Download         Length: 405 bp        

>NTDB_id=908437 SOI70_RS13730 WP_005079001.1 2852873..2853277(-) (comEA) [Acinetobacter pittii strain HUM3]
ATGCAGCTCAGCATGAATCTTTGGAAGAATAAGCACAATATTTTCATTATTTTATTTTGGAGCCTGATCTCATCAACGTC
AGTTCAGGCTCAATCTTTTGATCAAAATTTTAAGGAGTGGAAGGCTAAACAGCAGAGGTATGATCAGAAGTTGAGCATGC
AGCACTCCTCTCATTCTAACAGTCCAAAAAGTTCAGTTATGACTGATTTGTCAGGGCAAATACACTTGAATCAAGCCAAT
ATTGATGAGCTCCAAAAGCTAAAAGGTATTGGTGAGAAAAAGGCTCAGGCAATTGTGGAATACCGTCAAAAGAATGGTGG
CTTTAAAAATATTGATGAATTTAAAAACGTAAAGGGCATTGGTCCAGCCATTTTTGAAAAGAATAAAATGCGTTTGACTT
TATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(73-133)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A022J074

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

70.073

100

0.716
  comEA Acinetobacter baumannii D1279779

69.343

100

0.709
  comEA Acinetobacter baylyi ADP1

43.548

92.537

0.403