Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   SOI71_RS03345 Genome accession   NZ_CP139251
Coordinates   687032..687415 (+) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter pittii strain MCR53     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 682032..692415
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SOI71_RS03335 (SOI71_03335) nolF 684931..686040 (-) 1110 WP_104075297.1 efflux RND transporter periplasmic adaptor subunit -
  SOI71_RS03340 (SOI71_03340) - 686109..686747 (-) 639 WP_069124015.1 hypothetical protein -
  SOI71_RS03345 (SOI71_03345) pilG 687032..687415 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  SOI71_RS03350 (SOI71_03350) pilH 687439..687801 (+) 363 WP_046811934.1 response regulator -
  SOI71_RS03355 (SOI71_03355) pilI 687858..688394 (+) 537 WP_104075253.1 chemotaxis protein CheW -
  SOI71_RS03360 (SOI71_03360) - 688441..690522 (+) 2082 WP_068565018.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=908329 SOI71_RS03345 WP_000389061.1 687032..687415(+) (pilG) [Acinetobacter pittii strain MCR53]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=908329 SOI71_RS03345 WP_000389061.1 687032..687415(+) (pilG) [Acinetobacter pittii strain MCR53]
ATGGAAGATGCGTTCCAAAATCTGAAAGTAATGGTGATTGATGACTCAAAAACCATTCGCCGTACAGCAGAAACCTTATT
ACAGCGTGAAGGCTGTGAAGTCATTACTGCTGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAAGCAAATCCAGATA
TTGTTTTTGTCGATATCATGATGCCTCGTTTAGACGGTTATCAAACCTGTGCGCTGATTAAGAACTCTCAAAATTATCAG
AACATTCCCGTTATTATGCTCTCTAGTAAAGATGGTCTGTTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGCTAAATGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37