Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   SOI76_RS03275 Genome accession   NZ_CP139249
Coordinates   679214..679597 (+) Length   127 a.a.
NCBI ID   WP_032056413.1    Uniprot ID   -
Organism   Acinetobacter pittii strain MCR8900     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 674214..684597
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SOI76_RS03265 (SOI76_03265) nolF 677113..678222 (-) 1110 WP_079284448.1 efflux RND transporter periplasmic adaptor subunit -
  SOI76_RS03270 (SOI76_03270) - 678291..678929 (-) 639 WP_205668429.1 hypothetical protein -
  SOI76_RS03275 (SOI76_03275) pilG 679214..679597 (+) 384 WP_032056413.1 twitching motility response regulator PilG Regulator
  SOI76_RS03280 (SOI76_03280) pilH 679620..679982 (+) 363 WP_002116220.1 response regulator -
  SOI76_RS03285 (SOI76_03285) pilI 680043..680579 (+) 537 WP_002116439.1 chemotaxis protein CheW -
  SOI76_RS03290 (SOI76_03290) pilJ 680622..682700 (+) 2079 WP_005072794.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14227.26 Da        Isoelectric Point: 4.5762

>NTDB_id=908287 SOI76_RS03275 WP_032056413.1 679214..679597(+) (pilG) [Acinetobacter pittii strain MCR8900]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVNS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=908287 SOI76_RS03275 WP_032056413.1 679214..679597(+) (pilG) [Acinetobacter pittii strain MCR8900]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTGATTGATGACTCAAAAACCATTCGCCGTACAGCGGAAACCTTATT
ACAGCGTGAAGGCTGTGAAGTGATTACTGCTGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAAGCAAATCCGGATA
TTGTTTTTGTCGATATCATGATGCCTCGTTTAGATGGTTATCAAACTTGTGCTTTGATAAAAAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGTTAAATGCGATTCGTAATCATGTAAATTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

99.213

100

0.992
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37