Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   SOI69_RS18550 Genome accession   NZ_CP139248
Coordinates   3914477..3914860 (+) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter pittii strain HCG18     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3909477..3919860
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SOI69_RS18540 (SOI69_18540) nolF 3912376..3913485 (-) 1110 WP_204085994.1 efflux RND transporter periplasmic adaptor subunit -
  SOI69_RS18545 (SOI69_18545) - 3913554..3914192 (-) 639 WP_044100316.1 hypothetical protein -
  SOI69_RS18550 (SOI69_18550) pilG 3914477..3914860 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  SOI69_RS18555 (SOI69_18555) pilH 3914883..3915245 (+) 363 WP_002116220.1 response regulator -
  SOI69_RS18560 (SOI69_18560) pilI 3915306..3915842 (+) 537 WP_002116439.1 chemotaxis protein CheW -
  SOI69_RS18565 (SOI69_18565) pilJ 3915885..3917963 (+) 2079 WP_320539757.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=908274 SOI69_RS18550 WP_000389061.1 3914477..3914860(+) (pilG) [Acinetobacter pittii strain HCG18]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=908274 SOI69_RS18550 WP_000389061.1 3914477..3914860(+) (pilG) [Acinetobacter pittii strain HCG18]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTGATTGATGACTCAAAAACCATTCGCCGTACAGCAGAAACCTTATT
ACAGCGTGAAGGCTGTGAAGTCATTACTGCTGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAAGCAAATCCGGATA
TTGTTTTTGTCGATATCATGATGCCTCGTTTAGATGGTTATCAAACTTGTGCTTTGATAAAAAACTCTCAAAATTATCAG
AATATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGTTAAACGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37