Detailed information NTG0908110

Bioinformatically predicted

Overview

• Name: comA/comEC
• Type: Machinery gene
• Locus tag: SJN48_RS04810
• Genome accession: NZ_CP139212
• Coordinates: 1022869..1025301 (+)
• Length: 810 a.a.
• NCBI ID: WP_130120329.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain WWTP
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	1022099..1029983	1022869..1025301	within	0

Gene organization within MGE regions

Location: 1022099..1029983

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SJN48_RS04805 (SJN48_04810)	lolD	1022099..1022785 (+)	687	WP_086265479.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
SJN48_RS04810 (SJN48_04815)	comA/comEC	1022869..1025301 (+)	2433	WP_130120329.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
SJN48_RS04815 (SJN48_04820)	-	1025254..1026237 (-)	984	WP_130120328.1	lysophospholipid acyltransferase family protein	-
SJN48_RS04820 (SJN48_04825)	sppA	1026371..1027387 (+)	1017	WP_005067744.1	signal peptide peptidase SppA	-
SJN48_RS04825 (SJN48_04830)	-	1027411..1028211 (+)	801	WP_017385815.1	alpha/beta fold hydrolase	-
SJN48_RS04830 (SJN48_04835)	purN	1028287..1028916 (-)	630	WP_005073082.1	phosphoribosylglycinamide formyltransferase	-
SJN48_RS04835 (SJN48_04840)	purM	1028913..1029983 (-)	1071	WP_017385817.1	phosphoribosylformylglycinamidine cyclo-ligase	-

Sequence

Protein

• Length: 810 a.a.
• Molecular weight: 92417.76 Da
• Isoelectric Point: 9.0841

>NTDB_id=908110 SJN48_RS04810 WP_130120329.1 1022869..1025301(+) (comA/comEC) [Acinetobacter pittii strain WWTP]
MLKLILMGWIGGIAFMGMDIPLIMQYGSVGKVLLVMGFIFYIFKRNIFLNRPILKTIYCLVCAISLFTIGHQYAQHALNE
RLQLRQMQPKSLDIVVYVDRISEEKEDKTQQPVQVLGQSLHPVNWLLYLKNQKVNSALDESKLQLGHYYRISGKTKPAHS
YAVAGVFDQEQWFIQRNIMSGFSVQHIEPLSSDEVYQLGYQQHLKEQQKFFNRQKLNIEKLRLTFRLMLKQSPLQNKGLL
LALLTGDESLLNDEIKNQFKELGISHLLAISGPHVLIFAIMFSWGLHQLVRRYYPQLYLHQPKQIWAMIPLCSGVLIYTA
FVGFEIPALRTLLSVFLFASLLLIKLPVKPFSLLVYSASLLLLFDPFSVLSAGFWLSYGSCFILLRIYQTIEQAPNVVST
SLLSKIILFGKILIESQGKIFIALCPLMLIFFQQISWVAPFTNIIVVPLLGGVIVPLNIFAACVWLIFNSFGNLLFQIND
VLISIVLSCFNLLEKLSLPLQGFSLTPLALVCLSFVIIILFLPRGVLPKSWGLICCLPLIIPDKSSQQIQLNIIDVGQGQ
AIFLQHPQQTWLIDTGGSYDEKAFSIGQNVVIPYLRQKGIKQLDHVVLSHLDQDHSGAFPSIAQAFPIKQVISNELWAEQ
IREPFTYCHQGQKWQYPQLDIEILWPKEKDLNLVSSNQNQYSCVVYIHLKQINGYQNYLIMGDAGWEAEYQLMKEYSDLK
VDVLVLGHHGSKHSSAYDFLATLKPKLVVASAGFNNRYGHPSKEVLARVQALNIPFKSTVEQGTLSFVSRNHEIVLYTRR
FERTWLHRNL

Nucleotide

• Length: 2433 bp

>NTDB_id=908110 SJN48_RS04810 WP_130120329.1 1022869..1025301(+) (comA/comEC) [Acinetobacter pittii strain WWTP]
ATGTTAAAACTTATTTTAATGGGGTGGATTGGGGGTATTGCATTTATGGGGATGGATATCCCTTTAATAATGCAATATGG
GTCGGTAGGTAAAGTCTTGCTTGTTATGGGCTTTATTTTTTATATTTTTAAGAGAAATATTTTCTTAAATCGCCCCATAT
TAAAAACCATTTACTGTCTAGTCTGTGCTATTAGTCTTTTTACTATAGGACATCAATATGCTCAGCATGCCTTAAATGAA
AGATTACAACTGCGACAAATGCAGCCTAAATCTTTAGATATTGTTGTGTATGTTGACCGTATAAGTGAAGAAAAAGAAGA
TAAGACACAACAACCCGTTCAGGTACTAGGGCAGTCCTTACATCCCGTCAATTGGCTTTTATATTTAAAAAATCAAAAAG
TAAACTCAGCGTTAGATGAATCAAAATTACAATTAGGCCATTATTATCGAATTTCTGGCAAAACCAAACCTGCTCATAGT
TACGCAGTGGCCGGTGTTTTCGACCAAGAACAATGGTTCATTCAACGAAATATAATGTCTGGTTTTAGTGTTCAGCATAT
TGAGCCTTTAAGCTCTGATGAAGTTTATCAGTTGGGTTATCAACAGCATTTAAAAGAGCAACAAAAATTCTTTAACAGAC
AAAAATTAAATATAGAAAAATTGCGTCTGACATTTAGATTAATGTTAAAACAATCTCCTTTACAAAATAAAGGATTGTTA
TTAGCTTTATTAACAGGGGATGAAAGTCTTTTAAATGATGAGATTAAAAATCAATTTAAGGAATTAGGAATCTCTCATTT
GTTGGCCATTTCAGGGCCTCATGTACTCATTTTTGCCATCATGTTCTCTTGGGGATTACATCAATTAGTACGACGATATT
ATCCGCAGCTTTATTTGCATCAACCTAAACAAATTTGGGCGATGATTCCATTATGTTCCGGTGTTTTGATTTATACGGCA
TTTGTTGGTTTTGAAATTCCCGCCTTACGAACTTTACTTTCAGTATTTTTATTTGCTTCTTTGTTATTAATTAAACTGCC
TGTTAAGCCATTTTCACTCTTGGTTTACAGTGCGAGTCTGCTTTTGCTTTTCGATCCCTTCAGTGTTTTATCCGCAGGAT
TTTGGCTCTCTTATGGTTCTTGCTTTATTTTATTACGGATTTATCAAACTATAGAGCAGGCTCCAAATGTTGTTTCAACT
AGTCTGTTATCTAAAATCATTCTTTTCGGCAAAATCTTAATTGAATCTCAAGGCAAAATATTTATAGCTCTATGTCCTTT
AATGCTGATTTTCTTTCAACAAATTTCATGGGTTGCTCCTTTTACAAATATTATTGTTGTTCCTTTACTCGGAGGAGTGA
TTGTTCCTTTAAATATTTTTGCAGCTTGTGTATGGCTTATTTTTAACTCATTCGGAAATTTACTTTTTCAAATTAATGAT
GTCCTGATTAGTATAGTACTGTCATGTTTTAATCTTTTAGAGAAGTTATCTCTACCATTACAAGGTTTTAGCCTGACACC
ACTTGCTTTGGTTTGTCTTAGCTTCGTTATTATTATCTTATTTTTACCGCGTGGGGTTTTACCCAAATCTTGGGGGCTAA
TATGCTGTTTACCTTTGATCATTCCAGATAAGTCGTCCCAGCAAATTCAATTAAATATTATAGATGTGGGGCAGGGGCAA
GCTATTTTCTTACAACACCCGCAGCAGACATGGCTCATCGATACGGGTGGATCTTATGATGAGAAAGCTTTTAGTATTGG
TCAAAATGTGGTGATTCCATATTTACGTCAAAAGGGAATTAAACAACTGGATCACGTCGTACTATCTCATCTTGACCAAG
ATCATAGCGGAGCATTTCCTTCAATCGCTCAGGCTTTTCCTATTAAACAAGTCATATCAAATGAATTATGGGCAGAGCAA
ATTAGAGAACCATTTACTTATTGTCATCAAGGCCAAAAATGGCAATATCCACAATTAGATATTGAAATTCTTTGGCCTAA
AGAAAAAGATTTAAACTTAGTTTCTTCAAATCAAAATCAATATTCTTGTGTGGTTTATATTCATTTAAAACAGATCAATG
GCTATCAAAATTATTTAATCATGGGCGATGCAGGGTGGGAAGCAGAATATCAACTCATGAAAGAATATTCTGATTTAAAG
GTAGATGTTCTGGTATTAGGTCATCATGGGAGTAAACATAGTTCGGCTTATGACTTTTTAGCGACTCTAAAACCAAAGCT
TGTTGTTGCCTCTGCTGGCTTTAATAATCGATACGGTCATCCAAGTAAAGAAGTGTTAGCGAGAGTACAAGCACTTAATA
TTCCGTTTAAAAGTACAGTTGAACAAGGAACATTAAGCTTTGTATCTCGCAATCATGAGATAGTTTTATATACTCGACGT
TTCGAACGTACTTGGCTTCACAGGAATTTGTGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (33-188)

• Metallo-beta-lactamase superfamily (Lactamase_B) (555-643)

• Competence protein (Competence) (243-522)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/comEC	Acinetobacter baumannii D1279779	70.457	99.877	0.704
comA/comEC	Acinetobacter baumannii strain A118	69.716	99.877	0.696
comA/comEC	Acinetobacter baylyi ADP1	48.585	100	0.488