Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | SJN48_RS01675 | Genome accession | NZ_CP139212 |
| Coordinates | 353633..354193 (+) | Length | 186 a.a. |
| NCBI ID | WP_078210318.1 | Uniprot ID | - |
| Organism | Acinetobacter pittii strain WWTP | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 348633..359193
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SJN48_RS01650 (SJN48_01655) | - | 350749..350904 (-) | 156 | Protein_316 | hypothetical protein | - |
| SJN48_RS01655 (SJN48_01660) | rpoZ | 350943..351221 (-) | 279 | WP_002116990.1 | DNA-directed RNA polymerase subunit omega | - |
| SJN48_RS01660 (SJN48_01665) | gmk | 351294..351923 (-) | 630 | WP_005804544.1 | guanylate kinase | - |
| SJN48_RS01665 (SJN48_01670) | ispH | 352046..352996 (+) | 951 | WP_002116992.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| SJN48_RS01670 (SJN48_01675) | fimU | 353166..353639 (+) | 474 | WP_005067119.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| SJN48_RS01675 (SJN48_01680) | pilV | 353633..354193 (+) | 561 | WP_078210318.1 | type IV pilus modification protein PilV | Machinery gene |
| SJN48_RS01680 (SJN48_01685) | pilW | 354193..355194 (+) | 1002 | WP_005804547.1 | PilW family protein | Machinery gene |
| SJN48_RS01685 (SJN48_01690) | pilX | 355191..356000 (+) | 810 | WP_046811883.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 186 a.a. Molecular weight: 19855.89 Da Isoelectric Point: 7.9105
>NTDB_id=908099 SJN48_RS01675 WP_078210318.1 353633..354193(+) (pilV) [Acinetobacter pittii strain WWTP]
MLMQGSKQKAQVGVGLLEVLVALILIAIGVLGYVALQVRAMDASSEALSKSQAIMIMRGLAENIRVNSSQASQYPAFVRS
YSNYSSTTAAPTLCFNTACTPSQLAQFDAYQAAKNADQLGMKITMTNCPGVTSTMAQQRQCLFVFWGKTAPVITTNEGVT
SADVSSCMSTNGVYVNNSNCLMMEAY
MLMQGSKQKAQVGVGLLEVLVALILIAIGVLGYVALQVRAMDASSEALSKSQAIMIMRGLAENIRVNSSQASQYPAFVRS
YSNYSSTTAAPTLCFNTACTPSQLAQFDAYQAAKNADQLGMKITMTNCPGVTSTMAQQRQCLFVFWGKTAPVITTNEGVT
SADVSSCMSTNGVYVNNSNCLMMEAY
Nucleotide
Download Length: 561 bp
>NTDB_id=908099 SJN48_RS01675 WP_078210318.1 353633..354193(+) (pilV) [Acinetobacter pittii strain WWTP]
ATGTTAATGCAGGGTTCTAAACAAAAAGCTCAAGTCGGGGTGGGTTTATTAGAAGTGTTGGTTGCCTTAATTTTAATTGC
GATAGGGGTTTTAGGATATGTTGCCTTGCAAGTTCGGGCTATGGATGCTTCTTCAGAGGCATTAAGCAAATCTCAAGCGA
TTATGATCATGAGAGGATTAGCAGAAAACATTCGCGTAAATAGTTCTCAAGCTAGTCAGTATCCCGCATTTGTCCGTAGT
TATAGCAATTATTCATCTACCACCGCAGCTCCTACGTTGTGTTTCAATACAGCTTGTACACCTTCTCAGCTTGCCCAATT
TGATGCATATCAAGCAGCAAAAAATGCTGATCAACTTGGCATGAAAATCACAATGACAAATTGCCCAGGGGTTACAAGCA
CGATGGCCCAGCAGAGGCAATGTCTTTTTGTTTTTTGGGGAAAAACCGCTCCAGTAATTACAACAAATGAGGGAGTCACG
AGCGCGGATGTGTCGAGCTGTATGAGTACAAATGGCGTTTATGTCAATAATTCGAACTGTTTAATGATGGAGGCATATTA
A
ATGTTAATGCAGGGTTCTAAACAAAAAGCTCAAGTCGGGGTGGGTTTATTAGAAGTGTTGGTTGCCTTAATTTTAATTGC
GATAGGGGTTTTAGGATATGTTGCCTTGCAAGTTCGGGCTATGGATGCTTCTTCAGAGGCATTAAGCAAATCTCAAGCGA
TTATGATCATGAGAGGATTAGCAGAAAACATTCGCGTAAATAGTTCTCAAGCTAGTCAGTATCCCGCATTTGTCCGTAGT
TATAGCAATTATTCATCTACCACCGCAGCTCCTACGTTGTGTTTCAATACAGCTTGTACACCTTCTCAGCTTGCCCAATT
TGATGCATATCAAGCAGCAAAAAATGCTGATCAACTTGGCATGAAAATCACAATGACAAATTGCCCAGGGGTTACAAGCA
CGATGGCCCAGCAGAGGCAATGTCTTTTTGTTTTTTGGGGAAAAACCGCTCCAGTAATTACAACAAATGAGGGAGTCACG
AGCGCGGATGTGTCGAGCTGTATGAGTACAAATGGCGTTTATGTCAATAATTCGAACTGTTTAATGATGGAGGCATATTA
A
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Acinetobacter baumannii D1279779 |
83.871 |
100 |
0.839 |