Detailed information NTG0908054

Bioinformatically predicted

Overview

• Name: comYH
• Type: Machinery gene
• Locus tag: SON02_RS05600
• Genome accession: NZ_CP139211
• Coordinates: 1314051..1315004 (-)
• Length: 317 a.a.
• NCBI ID: WP_135027174.1
• Uniprot ID: -
• Organism: Streptococcus sp. LysM4
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1309051..1320004

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SON02_RS05580 (SON02_05565)	-	1310325..1310888 (-)	564	WP_135027169.1	folate family ECF transporter S component	-
SON02_RS05585 (SON02_05570)	-	1311107..1311634 (-)	528	WP_135027213.1	ECF transporter S component	-
SON02_RS05590 (SON02_05575)	-	1311634..1312491 (-)	858	WP_135027171.1	pyridoxamine kinase	-
SON02_RS05595 (SON02_05580)	-	1312811..1314001 (-)	1191	WP_135027173.1	acetate kinase	-
SON02_RS05600 (SON02_05585)	comYH	1314051..1315004 (-)	954	WP_135027174.1	class I SAM-dependent methyltransferase	Machinery gene
SON02_RS05605 (SON02_05590)	comGG	1315027..1315422 (-)	396	WP_135027176.1	competence type IV pilus minor pilin ComGG	-
SON02_RS05610 (SON02_05595)	comYF	1315433..1315867 (-)	435	WP_135027179.1	competence type IV pilus minor pilin ComGF	Machinery gene
SON02_RS05615 (SON02_05600)	comGE	1315854..1316108 (-)	255	WP_228063764.1	competence type IV pilus minor pilin ComGE	-
SON02_RS05620 (SON02_05605)	comGD	1316119..1316496 (-)	378	WP_373273837.1	competence type IV pilus minor pilin ComGD	-
SON02_RS05625 (SON02_05610)	comGC/cglC	1316507..1316821 (-)	315	WP_135027183.1	competence type IV pilus major pilin ComGC	Machinery gene
SON02_RS05630 (SON02_05615)	comYB	1316823..1317851 (-)	1029	WP_135027184.1	competence type IV pilus assembly protein ComGB	Machinery gene
SON02_RS05635 (SON02_05620)	comGA/cglA/cilD	1317772..1318722 (-)	951	WP_135027186.1	competence type IV pilus ATPase ComGA	Machinery gene
SON02_RS05640 (SON02_05625)	-	1318892..1319254 (-)	363	WP_135027188.1	DUF1033 family protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 36064.06 Da
• Isoelectric Point: 4.5370

>NTDB_id=908054 SON02_RS05600 WP_135027174.1 1314051..1315004(-) (comYH) [Streptococcus sp. LysM4]
MNFEKIEQAYDLLLENVQTLQNLLGTNFYDALIEQNAAYLAGNHEHEVIVANIEALKQLQLTAEEWRRSYQFLFIKANQT
EPMQYNHQFTPDSIGFILTFLLDHLVSEKQVTVLEIGSGTGNLAQTILNHSQKKIDYLGIEVDDLLIDLSASIADVMESS
SHFAQGDAIRPQILKESQVIIGDLPIGYYPDDRIAQRYQVASSTEHTYAHHLLMEQSLKYLKQGGYAILLAPNDLLTSPQ
SPLLKAWLQDNARVVAVLTLPSNLFGTQLMAKTIFVLQKQTDMLVETFMYPLTDLQNLEELQQFTENFKKWKQDNAI

Nucleotide

• Length: 954 bp

>NTDB_id=908054 SON02_RS05600 WP_135027174.1 1314051..1315004(-) (comYH) [Streptococcus sp. LysM4]
ATGAATTTTGAAAAAATTGAACAGGCGTATGACTTGCTGTTAGAAAATGTCCAAACCCTCCAAAATCTTTTGGGAACAAA
CTTTTATGATGCTTTGATTGAGCAGAATGCTGCTTATTTGGCAGGCAACCATGAGCATGAAGTTATTGTTGCTAATATTG
AAGCTCTAAAGCAGTTGCAGTTGACGGCTGAGGAGTGGCGCAGGTCCTATCAATTTCTCTTTATCAAAGCTAATCAGACA
GAACCGATGCAGTACAATCATCAATTTACTCCAGACAGTATTGGCTTTATCTTGACCTTTCTGTTGGACCACTTGGTGAG
TGAGAAACAGGTTACTGTCTTGGAAATTGGTTCTGGAACTGGTAATCTGGCGCAAACAATTTTAAATCATAGCCAGAAAA
AAATTGACTATCTCGGCATTGAAGTGGATGATTTGTTGATTGACCTATCTGCAAGTATTGCGGATGTGATGGAAAGTAGT
AGCCATTTTGCTCAAGGAGATGCGATTCGTCCGCAGATTTTAAAAGAAAGTCAAGTCATCATTGGTGATTTACCAATTGG
TTACTATCCAGATGATCGCATAGCTCAGCGCTATCAAGTGGCAAGTTCAACAGAGCATACCTATGCTCATCACTTGTTGA
TGGAACAGTCCTTGAAATATTTAAAACAGGGTGGATATGCTATCTTACTTGCACCAAATGATTTACTGACCAGTCCTCAA
AGTCCGCTCTTGAAAGCTTGGTTACAAGATAATGCCAGAGTTGTTGCGGTACTGACCTTACCGTCTAATTTATTTGGGAC
ACAGCTGATGGCGAAAACGATTTTTGTATTACAGAAGCAGACGGATATGCTGGTAGAGACTTTTATGTATCCATTGACGG
ATTTACAAAATCTGGAAGAATTGCAACAGTTTACTGAGAATTTCAAAAAATGGAAACAAGATAATGCAATTTAA

Domains

Predicted by InterproScan.

• N-6 DNA Methylase (N6_Mtase) (70-299)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYH	Streptococcus mutans UA140	63.924	99.685	0.637
comYH	Streptococcus mutans UA159	63.608	99.685	0.634