Detailed information NTG0906951

Bioinformatically predicted

Overview

• Name: comA/comEC
• Type: Machinery gene
• Locus tag: SDC64_RS04685
• Genome accession: NZ_CP139048
• Coordinates: 1002512..1004950 (+)
• Length: 812 a.a.
• NCBI ID: WP_320533145.1
• Uniprot ID: -
• Organism: Acinetobacter haemolyticus strain JS-1us
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	1001742..1009744	1002512..1004950	within	0

Gene organization within MGE regions

Location: 1001742..1009744

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SDC64_RS04680 (SDC64_04680)	lolD	1001742..1002428 (+)	687	WP_075315118.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
SDC64_RS04685 (SDC64_04685)	comA/comEC	1002512..1004950 (+)	2439	WP_320533145.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
SDC64_RS04690 (SDC64_04690)	-	1004939..1005895 (-)	957	WP_151211732.1	lysophospholipid acyltransferase family protein	-
SDC64_RS04695 (SDC64_04695)	sppA	1006035..1007057 (+)	1023	WP_320533146.1	signal peptide peptidase SppA	-
SDC64_RS04700 (SDC64_04700)	-	1007204..1008001 (+)	798	WP_320533147.1	alpha/beta hydrolase	-
SDC64_RS04705 (SDC64_04705)	purN	1008048..1008677 (-)	630	WP_320533476.1	phosphoribosylglycinamide formyltransferase	-
SDC64_RS04710 (SDC64_04710)	purM	1008674..1009744 (-)	1071	WP_320533148.1	phosphoribosylformylglycinamidine cyclo-ligase	-

Sequence

Protein

• Length: 812 a.a.
• Molecular weight: 93369.42 Da
• Isoelectric Point: 8.7403

>NTDB_id=906951 SDC64_RS04685 WP_320533145.1 1002512..1004950(+) (comA/comEC) [Acinetobacter haemolyticus strain JS-1us]
MLKIILLGWVAGIALMGMHFPIITSTWWLWLIIAFAIFGFGFYWKKQYFHYPTYKALLLISATWALFCTGYHYADIQLQQ
RLIFKEQNVETFEAIVYIKKISELNENGEKQVAEVLNRHAQSVNWFLHLRKEKDTSKVEPEFQLGHYYRVSGQIRPAHSY
AVPGAFDLEKWFLQQNVQSGFSVRNIQPIHEDELYQLGYHHHLQQQQSHWAIFLLAVEKKRLAFRQMLQASAFQHKGLLL
ALLTGDESLLSDAVKQQFQHLGISHLLAISGPHVLVFALILTWSLQKLIQRYCPSIYLKQPRQLLLLLPFIFSVLLYVAF
VGFEIPAMRTLLTVSIVSAFMCLRQSIQAFSVLVYSASLLLVLDPFSILSAAFWLSYGACFILIRIYQTIIQLPQNVNLT
FKQKMIWGSHILIESQWKIFVALLPLVLIFFQQVSWFAPLTNLIAIPLLGACIVPLDILAACVWLIIPTLGQWLFQMNDV
FLSFLMLILDVLQSISPQLYGISFTPWMMVSLIIGIFLLFLPRDIVPKFWAAICFLPILWGVKAQPEALHVLDVGQGQAV
LVQHTKGNLLIDTGGSFDEAKFSMGERVIIPFLRQQGIRRLEHVVLSHLDQDHSGAFTSIQNSFEIDLVQSNEKHEKMQF
KENFSFCQQGQQWSFPNINIQILFPRANELSYAKYQKNEYSCVLYVQFLDAQTYQNFLIMGDAGWETEYKLLQQYPDLKV
DVLILGHHGSKHSSAYEFLASLKPKLTIASAGFNNRYGHPSQEVLKRLQHLNIPILNTADAGTISFMMNNHDGVLLQHRQ
KRKWLSKNSLSN

Nucleotide

• Length: 2439 bp

>NTDB_id=906951 SDC64_RS04685 WP_320533145.1 1002512..1004950(+) (comA/comEC) [Acinetobacter haemolyticus strain JS-1us]
ATGCTAAAAATTATTTTATTGGGGTGGGTTGCGGGTATCGCACTTATGGGAATGCATTTCCCGATCATTACATCTACATG
GTGGCTTTGGCTGATTATTGCATTCGCGATCTTTGGTTTCGGATTTTATTGGAAAAAGCAGTATTTTCATTATCCTACTT
ATAAAGCCTTGCTTTTAATCAGTGCGACTTGGGCATTATTTTGCACAGGTTATCATTATGCTGATATTCAATTACAACAA
CGTCTTATTTTTAAAGAACAAAATGTTGAAACATTTGAAGCCATTGTTTATATCAAAAAGATCAGTGAACTCAATGAAAA
TGGCGAGAAACAAGTTGCTGAGGTTTTGAATCGACATGCACAAAGTGTGAATTGGTTTCTTCATTTAAGAAAAGAAAAAG
ACACATCTAAAGTAGAACCAGAATTTCAATTGGGTCATTACTATCGTGTATCTGGGCAAATTCGACCCGCCCATAGTTAT
GCCGTCCCTGGCGCATTCGATCTGGAAAAATGGTTTTTACAACAAAATGTGCAGTCGGGATTTTCTGTACGAAATATTCA
ACCTATTCATGAAGATGAACTCTATCAGCTGGGTTATCATCATCATTTGCAGCAACAACAATCTCATTGGGCCATATTCT
TATTAGCTGTTGAAAAAAAGCGTCTGGCTTTTCGACAAATGCTACAGGCATCAGCATTCCAACATAAAGGGTTGCTATTG
GCTTTGCTCACAGGGGATGAGAGTCTGTTATCTGATGCCGTAAAACAACAATTTCAACACCTTGGGATTTCACATTTATT
GGCTATTTCTGGACCCCATGTGTTGGTATTTGCATTGATACTGACTTGGTCATTACAAAAGTTGATTCAGCGTTACTGCC
CAAGCATCTATTTGAAGCAACCTCGACAATTACTACTATTGTTGCCCTTTATCTTTAGTGTCTTGTTATATGTGGCATTT
GTTGGGTTTGAAATTCCGGCAATGAGAACATTATTAACAGTCAGTATTGTCAGTGCTTTTATGTGCTTAAGACAGTCGAT
TCAGGCATTTAGTGTGTTGGTTTATAGTGCGAGCTTATTGTTAGTTTTAGATCCATTTAGCATTTTATCTGCTGCATTTT
GGTTATCTTATGGCGCGTGTTTTATTTTGATAAGAATCTATCAGACGATTATACAGTTACCACAAAATGTAAATTTAACA
TTTAAACAAAAAATGATCTGGGGCAGTCATATTCTGATTGAATCGCAATGGAAAATTTTTGTCGCGTTATTGCCTTTGGT
TTTGATTTTCTTTCAGCAAGTTTCATGGTTTGCCCCCTTAACTAATCTTATTGCTATCCCATTGTTAGGTGCTTGTATTG
TTCCTTTAGATATTCTAGCTGCATGTGTGTGGTTAATTATTCCTACATTAGGGCAGTGGTTATTTCAAATGAATGATGTG
TTTTTGTCATTCTTGATGCTGATTTTAGATGTACTTCAATCGATTTCGCCGCAGTTGTATGGGATAAGTTTCACTCCTTG
GATGATGGTGAGTTTAATTATCGGTATTTTTCTATTGTTTTTGCCTAGAGATATTGTTCCAAAGTTTTGGGCTGCTATCT
GTTTCTTACCGATATTATGGGGTGTAAAAGCTCAACCCGAAGCATTGCACGTATTAGATGTTGGTCAAGGACAAGCTGTC
TTAGTACAACATACCAAAGGTAATCTCCTGATTGATACTGGTGGATCATTTGACGAAGCCAAATTCAGTATGGGGGAGCG
AGTGATTATTCCTTTTCTACGTCAACAAGGTATTCGGCGATTGGAACACGTTGTGTTATCTCATTTGGATCAAGATCATA
GTGGAGCATTTACGTCGATTCAGAATAGTTTTGAAATTGATTTGGTTCAATCGAATGAAAAGCATGAAAAAATGCAATTT
AAGGAGAATTTTTCATTTTGCCAACAAGGGCAACAGTGGTCATTCCCAAACATCAACATCCAAATTTTATTTCCTCGAGC
CAATGAATTGAGCTATGCGAAATATCAGAAAAATGAATATTCTTGTGTGCTCTATGTGCAATTTTTAGATGCTCAAACTT
ATCAGAACTTTTTGATTATGGGGGATGCAGGCTGGGAAACCGAATATAAATTGTTACAGCAGTATCCAGATTTAAAAGTC
GATGTGTTAATTCTTGGTCATCATGGCAGTAAGCATAGCTCTGCTTACGAATTTTTGGCAAGCCTCAAGCCCAAACTTAC
AATCGCTTCTGCGGGATTTAATAATCGTTACGGACATCCCAGTCAGGAGGTTTTAAAACGATTGCAGCACTTAAATATTC
CAATATTAAATACAGCAGATGCGGGTACGATCAGCTTTATGATGAATAATCATGATGGGGTGTTGCTACAGCATCGACAA
AAAAGAAAATGGTTATCCAAAAATAGCCTAAGTAATTGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (242-523)

• Domain of unknown function (DUF4131) (DUF4131) (23-187)

• Metallo-beta-lactamase superfamily (Lactamase_B) (553-626)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/comEC	Acinetobacter baumannii D1279779	54.444	99.754	0.543
comA/comEC	Acinetobacter baumannii strain A118	53.951	99.754	0.538
comA/comEC	Acinetobacter baylyi ADP1	50.123	99.754	0.5