Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   SIC19_RS11310 Genome accession   NZ_CP138916
Coordinates   2485141..2485533 (-) Length   130 a.a.
NCBI ID   WP_007154228.1    Uniprot ID   -
Organism   Marinobacter sp. MIT930201     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2480141..2490533
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SIC19_RS11290 - 2481086..2481985 (-) 900 WP_127401943.1 CheR family methyltransferase -
  SIC19_RS11295 - 2482013..2484088 (-) 2076 WP_185906457.1 methyl-accepting chemotaxis protein -
  SIC19_RS11300 - 2484180..2484725 (-) 546 WP_007154226.1 chemotaxis protein CheW -
  SIC19_RS11305 pilH 2484746..2485108 (-) 363 WP_007154227.1 twitching motility response regulator PilH -
  SIC19_RS11310 pilG 2485141..2485533 (-) 393 WP_007154228.1 twitching motility response regulator PilG Regulator
  SIC19_RS11315 gshB 2485829..2486776 (+) 948 WP_075194698.1 glutathione synthase -
  SIC19_RS11320 - 2486816..2487682 (+) 867 WP_085678515.1 energy transducer TonB -
  SIC19_RS11325 - 2487679..2488245 (+) 567 WP_036211379.1 YqgE/AlgH family protein -
  SIC19_RS11330 ruvX 2488238..2488678 (+) 441 WP_041333003.1 Holliday junction resolvase RuvX -
  SIC19_RS11335 pyrR 2488711..2489220 (+) 510 WP_036211374.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  SIC19_RS11340 - 2489252..2490265 (+) 1014 WP_036211371.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14594.87 Da        Isoelectric Point: 6.3343

>NTDB_id=905861 SIC19_RS11310 WP_007154228.1 2485141..2485533(-) (pilG) [Marinobacter sp. MIT930201]
MDDNFENLKIMVIDDSKTIRRTAETLLKKVGCEVITATDGFDALAKIADSQPNIIFVDIMMPRLDGYQTCALIKNNSSFK
KTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKDELLNTIRQYVPQAEQ

Nucleotide


Download         Length: 393 bp        

>NTDB_id=905861 SIC19_RS11310 WP_007154228.1 2485141..2485533(-) (pilG) [Marinobacter sp. MIT930201]
ATGGATGACAACTTCGAGAATCTGAAGATTATGGTGATCGACGACAGCAAGACCATTCGTCGCACCGCCGAAACCCTTCT
TAAGAAAGTCGGTTGCGAAGTCATTACCGCAACGGATGGCTTTGACGCTCTGGCGAAAATCGCCGATTCCCAACCCAATA
TCATTTTCGTCGATATCATGATGCCCCGGTTGGACGGCTACCAGACCTGCGCACTGATCAAGAACAACTCCTCTTTCAAA
AAGACGCCGGTCATCATGCTCTCCAGTAAAGACGGACTGTTCGACAAGGCCAAAGGCCGGATTGTCGGTTCAGACCAGTA
TCTGACCAAACCGTTCAGCAAGGACGAGCTTCTAAACACGATTCGCCAGTATGTTCCCCAGGCGGAACAATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

77.6

96.154

0.746
  vicR Streptococcus mutans UA159

41.322

93.077

0.385
  micA Streptococcus pneumoniae Cp1015

43.119

83.846

0.362