Detailed information NTG0090424

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: L6429_RS10335
• Genome accession: NZ_AP025196
• Coordinates: 1994993..1995781 (-)
• Length: 262 a.a.
• NCBI ID: WP_237021094.1
• Uniprot ID: -
• Organism: Helicobacter cinaedi strain T36
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1989993..2000781

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L6429_RS10305 (T36_2075)	-	1989995..1990192 (+)	198	WP_237021090.1	hypothetical protein	-
L6429_RS10310 (T36_2076)	cysE	1990211..1990975 (-)	765	WP_237021091.1	serine O-acetyltransferase	-
L6429_RS10315 (T36_2077)	speA	1990989..1992839 (-)	1851	WP_237021092.1	biosynthetic arginine decarboxylase	-
L6429_RS10320 (T36_2078)	ybeY	1993024..1993566 (+)	543	WP_052086346.1	rRNA maturation RNase YbeY	-
L6429_RS11460 (T36_2079)	-	1993586..1993708 (+)	123	WP_268903679.1	hypothetical protein	-
L6429_RS10325 (T36_2080)	-	1993830..1994471 (-)	642	WP_034585053.1	TetR/AcrR family transcriptional regulator	-
L6429_RS10330 (T36_2081)	dprB	1994571..1994993 (-)	423	WP_237021093.1	Holliday junction resolvase RuvX	Machinery gene
L6429_RS10335 (T36_2082)	dprA	1994993..1995781 (-)	789	WP_237021094.1	DNA-processing protein DprA	Machinery gene
L6429_RS10340 (T36_2083)	-	1995814..1996872 (-)	1059	WP_237021095.1	divergent polysaccharide deacetylase family protein	-
L6429_RS10345 (T36_2084)	minE	1996873..1997124 (-)	252	WP_237021096.1	cell division topological specificity factor MinE	-
L6429_RS10350 (T36_2085)	minD	1997121..1997936 (-)	816	WP_237021097.1	septum site-determining protein MinD	-
L6429_RS10355 (T36_2086)	-	1998234..1998608 (-)	375	WP_237021098.1	GIY-YIG nuclease family protein	-
L6429_RS11485	-	1999057..1999329 (-)	273	WP_336604675.1	restriction endonuclease subunit S	-
L6429_RS11490	-	1999411..2000083 (-)	673	Protein_2032	restriction endonuclease subunit S	-
L6429_RS10370 (T36_2090)	-	2000096..2000278 (-)	183	WP_138160950.1	hypothetical protein	-

Sequence

Protein

• Length: 262 a.a.
• Molecular weight: 29351.13 Da
• Isoelectric Point: 8.5918

>NTDB_id=90424 L6429_RS10335 WP_237021094.1 1994993..1995781(-) (dprA) [Helicobacter cinaedi strain T36]
MKQADIQSLESIPSNLKALKNPPKKLFYKGGALDSLLQAEPKIAIVGTRKPNPYTKSFVAKLASNIAKLQGVVISGGAIG
VDIIAHTHAFPRTIMFSPSSLDIYYPRSNKAMIEKMMQESAVISEYESPYMPHRFSFLERNRLVIALSDVVIIPQADKQS
GSMQSARIACELKKELFVLPHRLGESEGTQELLAKGKAQCIYDINAFLEKIFGVKLQENDEVLEFCMKNPSFEEAYLKFG
EKIYEYELEGKIVRESGNIRVL

Nucleotide

• Length: 789 bp

>NTDB_id=90424 L6429_RS10335 WP_237021094.1 1994993..1995781(-) (dprA) [Helicobacter cinaedi strain T36]
ATGAAACAAGCGGATATACAATCTTTAGAATCTATCCCTTCAAATCTCAAAGCGTTAAAAAATCCACCAAAAAAGCTTTT
TTATAAGGGTGGGGCGTTAGATTCACTGCTTCAAGCAGAGCCTAAAATCGCCATTGTCGGCACAAGAAAGCCTAATCCTT
ACACAAAGTCCTTTGTCGCTAAACTTGCTTCAAATATCGCAAAGCTTCAAGGCGTGGTGATAAGCGGAGGGGCGATAGGT
GTAGATATTATCGCCCATACTCACGCTTTCCCACGCACGATAATGTTCTCCCCCTCAAGCCTAGATATTTACTATCCGCG
TTCAAATAAGGCTATGATTGAAAAAATGATGCAAGAATCTGCGGTAATAAGCGAGTATGAAAGCCCATATATGCCCCATA
GATTTAGCTTTTTGGAGCGAAATCGGCTTGTGATTGCCCTAAGTGATGTGGTGATTATCCCTCAAGCAGATAAGCAAAGT
GGCTCAATGCAGAGTGCGAGAATCGCCTGTGAGCTTAAAAAAGAGCTTTTTGTTTTGCCTCATCGTTTGGGGGAGAGTGA
GGGGACACAGGAGCTTTTAGCCAAGGGCAAGGCACAATGTATTTATGATATAAATGCGTTTTTGGAGAAGATTTTTGGCG
TGAAGTTGCAAGAAAATGATGAGGTTTTGGAGTTTTGTATGAAGAATCCTAGCTTTGAAGAGGCGTATTTAAAATTTGGT
GAGAAGATTTATGAATACGAGCTTGAAGGCAAAATCGTGCGTGAATCTGGAAACATACGGGTGCTTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (11-201)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	55.159	96.183	0.531
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.936	89.695	0.439