Detailed information NTG0903773

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: SD459_RS17825
• Genome accession: NZ_CP138627
• Coordinates: 3517436..3518599 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain AYGS-17
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3512436..3523599

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SD459_RS17795 (SD459_17790)	-	3512701..3513120 (-)	420	WP_014419009.1	TIGR03826 family flagellar region protein	-
SD459_RS17800 (SD459_17795)	comFC	3513194..3513883 (-)	690	WP_199803302.1	phosphoribosyltransferase family protein	Machinery gene
SD459_RS17805 (SD459_17800)	-	3513889..3514173 (-)	285	WP_022553866.1	late competence development ComFB family protein	-
SD459_RS17810 (SD459_17805)	comFA	3514231..3515616 (-)	1386	WP_063636495.1	DEAD/DEAH box helicase	Machinery gene
SD459_RS17815 (SD459_17810)	-	3515724..3516572 (-)	849	WP_003151387.1	DegV family protein	-
SD459_RS17820 (SD459_17815)	degU	3516670..3517359 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
SD459_RS17825 (SD459_17820)	degS	3517436..3518599 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
SD459_RS17830 (SD459_17825)	-	3518822..3519469 (+)	648	WP_063636496.1	YigZ family protein	-
SD459_RS17835 (SD459_17830)	-	3519474..3520667 (+)	1194	WP_017418814.1	LCP family protein	-
SD459_RS17840 (SD459_17835)	-	3520767..3521843 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
SD459_RS17845 (SD459_17840)	tuaH	3521975..3523171 (-)	1197	WP_017418813.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=903773 SD459_RS17825 WP_003151385.1 3517436..3518599(-) (degS) [Bacillus velezensis strain AYGS-17]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=903773 SD459_RS17825 WP_003151385.1 3517436..3518599(-) (degS) [Bacillus velezensis strain AYGS-17]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTCCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948