Detailed information NTG0903213

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: ABI226_RS15080
• Genome accession: NZ_CP157216
• Coordinates: 2840400..2841005 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis subsp. subtilis isolate FELIX_MS22
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2835400..2846005

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABI226_RS15050 (ABI226_15050)	-	2836213..2836602 (+)	390	WP_004398667.1	TIGR04086 family membrane protein	-
ABI226_RS15055 (ABI226_15055)	yajC	2836659..2836925 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
ABI226_RS15060 (ABI226_15060)	tgt	2836962..2838107 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
ABI226_RS15065 (ABI226_15065)	queA	2838134..2839162 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
ABI226_RS15070 (ABI226_15070)	yrzS	2839192..2839392 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
ABI226_RS15075 (ABI226_15075)	ruvB	2839385..2840389 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
ABI226_RS15080 (ABI226_15080)	ruvA	2840400..2841005 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
ABI226_RS15085 (ABI226_15085)	bofC	2841144..2841656 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
ABI226_RS15090 (ABI226_15090)	csbX	2841704..2843011 (-)	1308	WP_003246197.1	MFS transporter	-
ABI226_RS15095 (ABI226_15095)	iolG	2843082..2844107 (-)	1026	WP_004398990.1	inositol 2-dehydrogenase	-
ABI226_RS15100 (ABI226_15100)	yrzF	2844345..2844992 (+)	648	WP_003246159.1	phosphotransferase	-
ABI226_RS15105 (ABI226_15105)	-	2845038..2845160 (-)	123	WP_003229707.1	hypothetical protein	-
ABI226_RS15110 (ABI226_15110)	yrzH	2845245..2845535 (+)	291	WP_003246047.1	DUF5412 family protein	-
ABI226_RS15115 (ABI226_15115)	-	2845542..2845682 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=903213 ABI226_RS15080 WP_003229717.1 2840400..2841005(-) (ruvA) [Bacillus subtilis subsp. subtilis isolate FELIX_MS22]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=903213 ABI226_RS15080 WP_003229717.1 2840400..2841005(-) (ruvA) [Bacillus subtilis subsp. subtilis isolate FELIX_MS22]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAAGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTATGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408