Detailed information NTG0903055

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: ABI116_RS15050
• Genome accession: NZ_CP157214
• Coordinates: 2835727..2836332 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis subsp. subtilis isolate FELIX_MS21
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2830727..2841332

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABI116_RS15020 (ABI116_15020)	-	2831540..2831929 (+)	390	WP_004398667.1	TIGR04086 family membrane protein	-
ABI116_RS15025 (ABI116_15025)	yajC	2831986..2832252 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
ABI116_RS15030 (ABI116_15030)	tgt	2832289..2833434 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
ABI116_RS15035 (ABI116_15035)	queA	2833461..2834489 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
ABI116_RS15040 (ABI116_15040)	yrzS	2834519..2834719 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
ABI116_RS15045 (ABI116_15045)	ruvB	2834712..2835716 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
ABI116_RS15050 (ABI116_15050)	ruvA	2835727..2836332 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
ABI116_RS15055 (ABI116_15055)	bofC	2836471..2836983 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
ABI116_RS15060 (ABI116_15060)	csbX	2837031..2838338 (-)	1308	WP_003246197.1	MFS transporter	-
ABI116_RS15065 (ABI116_15065)	iolG	2838409..2839434 (-)	1026	WP_004398990.1	inositol 2-dehydrogenase	-
ABI116_RS15070 (ABI116_15070)	yrzF	2839672..2840319 (+)	648	WP_003246159.1	phosphotransferase	-
ABI116_RS15075 (ABI116_15075)	-	2840365..2840487 (-)	123	WP_003229707.1	hypothetical protein	-
ABI116_RS15080 (ABI116_15080)	yrzH	2840572..2840862 (+)	291	WP_003246047.1	DUF5412 family protein	-
ABI116_RS15085 (ABI116_15085)	-	2840869..2841009 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=903055 ABI116_RS15050 WP_003229717.1 2835727..2836332(-) (ruvA) [Bacillus subtilis subsp. subtilis isolate FELIX_MS21]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=903055 ABI116_RS15050 WP_003229717.1 2835727..2836332(-) (ruvA) [Bacillus subtilis subsp. subtilis isolate FELIX_MS21]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAAGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTATGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408