Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   SD207_RS03130 Genome accession   NZ_CP138324
Coordinates   645109..645492 (+) Length   127 a.a.
NCBI ID   WP_002046721.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain JBAB     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 640109..650492
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SD207_RS03120 (SD207_03120) - 643011..644129 (-) 1119 WP_001260821.1 efflux RND transporter periplasmic adaptor subunit -
  SD207_RS03125 (SD207_03125) - 644189..644827 (-) 639 WP_002046755.1 hypothetical protein -
  SD207_RS03130 (SD207_03130) pilG 645109..645492 (+) 384 WP_002046721.1 twitching motility response regulator PilG Regulator
  SD207_RS03135 (SD207_03135) - 645516..645878 (+) 363 WP_000101096.1 PleD family two-component system response regulator -
  SD207_RS03140 (SD207_03140) - 645939..646475 (+) 537 WP_000729762.1 chemotaxis protein CheW -
  SD207_RS03145 (SD207_03145) - 646522..648600 (+) 2079 WP_002046750.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14228.28 Da        Isoelectric Point: 4.5762

>NTDB_id=901752 SD207_RS03130 WP_002046721.1 645109..645492(+) (pilG) [Acinetobacter baumannii strain JBAB]
MEDVFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=901752 SD207_RS03130 WP_002046721.1 645109..645492(+) (pilG) [Acinetobacter baumannii strain JBAB]
ATGGAAGATGTATTCCAAAATCTGAAAGTAATGGTTATTGATGACTCAAAAACTATTCGCCGTACCGCAGAAACTCTATT
GCAACGCGAAGGTTGCGAAGTGATTACTGCTGTCGATGGATTTGAAGCTTTATCTAAAATTGCTGAAGCGAATCCGGATA
TTGTTTTTGTAGATATCATGATGCCTCGTTTAGACGGTTATCAAACTTGTGCTTTGATTAAGAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
TTTGACGAAACCTTTTAGCAAAGATGAATTGCTAAATGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

99.213

100

0.992
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37