Detailed information NTG0901375

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: RA179_RS18545
• Genome accession: NZ_CP138201
• Coordinates: 3585611..3586768 (-)
• Length: 385 a.a.
• NCBI ID: WP_024123030.1
• Uniprot ID: A0A9Q6F2U6
• Organism: Bacillus halotolerans strain DY299
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3580611..3591768

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RA179_RS18515 (RA179_18515)	-	3580872..3581291 (-)	420	WP_024123026.1	TIGR03826 family flagellar region protein	-
RA179_RS18520 (RA179_18520)	comFC	3581365..3582087 (-)	723	WP_142396176.1	double zinc ribbon domain-containing protein	Machinery gene
RA179_RS18525 (RA179_18525)	-	3582051..3582347 (-)	297	WP_024123028.1	competence protein ComFB	-
RA179_RS18530 (RA179_18530)	comFA	3582393..3583790 (-)	1398	WP_106021953.1	ATP-dependent helicase ComFA	Machinery gene
RA179_RS18535 (RA179_18535)	-	3583897..3584742 (-)	846	WP_106019639.1	DegV family protein	-
RA179_RS18540 (RA179_18540)	degU	3584839..3585528 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
RA179_RS18545 (RA179_18545)	degS	3585611..3586768 (-)	1158	WP_024123030.1	two-component sensor histidine kinase DegS	Regulator
RA179_RS18550 (RA179_18550)	-	3586985..3587638 (+)	654	WP_044159478.1	YigZ family protein	-
RA179_RS18555 (RA179_18555)	-	3587638..3588816 (+)	1179	WP_024123032.1	LCP family protein	-
RA179_RS18560 (RA179_18560)	-	3588888..3589964 (-)	1077	WP_151174552.1	MraY family glycosyltransferase	-
RA179_RS18565 (RA179_18565)	-	3590108..3591298 (-)	1191	WP_106019940.1	glycosyltransferase family 1 protein	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44871.71 Da
• Isoelectric Point: 6.7798

>NTDB_id=901375 RA179_RS18545 WP_024123030.1 3585611..3586768(-) (degS) [Bacillus halotolerans strain DY299]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTEDKRLAPQFEVALFRLAQEAVSNALKHSGSEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=901375 RA179_RS18545 WP_024123030.1 3585611..3586768(-) (degS) [Bacillus halotolerans strain DY299]
ATGAATAAAACAAAGATGGATTCCAAAGTTCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
TGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TTTATGAAGTCATCGAGCTTGGTGATAAACTTGAAGTGCAAACCCGTCATGCGCGAAACCGTTTATCCGAGGTCAGCCGC
AATTTTCATAGATTCAGTGAAGAAGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAAGTAGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAATTGCGCGAACGCCGGGACGATTTGGAACGCAGACTGCTAGGACTTCAGGAAATCATCGAAC
GCTCAGAATCACTAGTGAGCCAGATTACGGTCGTGCTGAACTATCTGAATCAGGATCTTCGGGAGGTTGGGCTGCTTCTT
GCCGATGCGCAGGCAAAACAGGATTTTGGCTTGAGAATTATTGAAGCGCAGGAAGAAGAGAGAAAAAGAGTCTCGAGAGA
AATTCACGACGGTCCTGCACAAATGCTGGCAAATGTTATGATGAGATCAGAATTAATTGAACGGATTTTCCGAGACCGAG
GCGCTGAAGACGGATTCCAGGAAATCAAAAATCTCCGACAAAATGTGCGGAATGCTCTTTACGAAGTGAGACGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTGCGGAAATATCTATATACAACCGAAGAATA
TAACGGTAAGGTGAAAATACATTTTCAGTGCATCGGCGATACGGAGGACAAACGACTCGCGCCTCAGTTTGAAGTTGCGC
TCTTCAGACTCGCACAGGAAGCTGTATCCAATGCGTTAAAGCATTCTGGATCTGAAGAAATTACAGTCAAAGTTGAGATT
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGCAAAGGATTTGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTTGGAATGAAAGAAAGAGTAGATTTATTGGAAGGAACCATGACAATAGATTCAAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTTTGA

Domains

Predicted by InterproScan.

• Histidine kinase (HisKA_3) (180-248)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	99.221	100	0.992