Detailed information NTG0901061

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: SA286_RS16845
• Genome accession: NZ_CP137888
• Coordinates: 3253077..3254252 (-)
• Length: 391 a.a.
• NCBI ID: WP_024719243.1
• Uniprot ID: A0A081LEM4
• Organism: Bacillus altitudinis strain ECC22
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3248077..3259252

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SA286_RS16815 (SA286_16815)	-	3248253..3248672 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
SA286_RS16820 (SA286_16820)	comFC	3248729..3249415 (-)	687	WP_324657589.1	ComF family protein	Machinery gene
SA286_RS16825 (SA286_16825)	-	3249412..3249705 (-)	294	WP_008348267.1	late competence development ComFB family protein	-
SA286_RS16830 (SA286_16830)	comFA	3249770..3251149 (-)	1380	WP_411161834.1	DEAD/DEAH box helicase	Machinery gene
SA286_RS16835 (SA286_16835)	-	3251269..3252111 (-)	843	WP_024719242.1	DegV family protein	-
SA286_RS16840 (SA286_16840)	degU	3252323..3253012 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
SA286_RS16845 (SA286_16845)	degS	3253077..3254252 (-)	1176	WP_024719243.1	sensor histidine kinase	Regulator
SA286_RS16850 (SA286_16850)	-	3254474..3255142 (+)	669	WP_017357860.1	YigZ family protein	-
SA286_RS16855 (SA286_16855)	-	3255127..3256224 (+)	1098	WP_268356769.1	LCP family protein	-
SA286_RS16860 (SA286_16860)	-	3256263..3257330 (-)	1068	WP_024719245.1	glycosyltransferase family 4 protein	-
SA286_RS16865 (SA286_16865)	tuaH	3257465..3258712 (-)	1248	WP_144666230.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45550.27 Da
• Isoelectric Point: 5.8757

>NTDB_id=901061 SA286_RS16845 WP_024719243.1 3253077..3254252(-) (degS) [Bacillus altitudinis strain ECC22]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTENERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=901061 SA286_RS16845 WP_024719243.1 3253077..3254252(-) (degS) [Bacillus altitudinis strain ECC22]
ATGACAACACCTAAAATGGATCCGAAGTTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGTAAGGA
CGAAGTATTTAGAATCGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTCAAGCAAATTAAACAGCAAG
TCAACGAAGTAATTGATTTTGGGGATAAACTAGAAGTACATACGAGACATGCTAGAAATCGATTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGAGAAGCCTATGAAAAAGCACATAACCTGCAAGTAGAATTGACCATGAT
CCAGCAGCGCGAAAAACAGCTGAGGGAAAGAAGAGATGATCTCGAAAGACGATTGTTAAGCCTGCAAGACGTCATTGAAC
GCTCTGAAACGCTTGTGAGCCAGATCACAGTGGTTCTCAACTATCTCAATCAGGACTTACGCCAAGTTGGCGTGTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCCCAGGAAGAAGAGCGCAAAAGGGTATCACGAGA
AATCCATGATGGACCTGCTCAGATGCTGGCAAACGTGATGATGCGTTCAGAACTAATTGAACGAATTTTTAGAGACCGTG
GAACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTAAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTCATTCCGACACTGCGAAAATACTTAAACACAATTGAAGAATA
TGATGGAAAAACCAAGATCACGTTCCAATGCCTAGGGGATACAGAAAATGAAAGAATTGCTTCTCAGTTCGAAGTGGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCATTGAAGCATTCCGAAGCTGAAGAAATCTCTGTAAAAGTAGAAGTG
ACAAAAGACTTTGTCACGTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAGGATGTTAAAACAAATAAAAACAA
ATCCTTTGGGTTACTTGGTATGAAAGAGCGCGTAGACTTACTAGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTAGAGTACCGTTAACATTACAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A0A081LEM4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841