Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   R2H34_RS13175 Genome accession   NZ_CP137746
Coordinates   2723615..2723998 (-) Length   127 a.a.
NCBI ID   WP_004640629.1    Uniprot ID   -
Organism   Acinetobacter sp. 16     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2718615..2728998
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R2H34_RS13160 - 2720523..2722610 (-) 2088 WP_279679553.1 methyl-accepting chemotaxis protein -
  R2H34_RS13165 - 2722657..2723193 (-) 537 WP_004908738.1 chemotaxis protein CheW -
  R2H34_RS13170 - 2723232..2723594 (-) 363 WP_004664659.1 response regulator -
  R2H34_RS13175 pilG 2723615..2723998 (-) 384 WP_004640629.1 twitching motility response regulator PilG Regulator
  R2H34_RS13180 - 2724278..2724946 (+) 669 WP_279676049.1 hypothetical protein -
  R2H34_RS13185 - 2725105..2726820 (+) 1716 WP_004908743.1 proline--tRNA ligase -
  R2H34_RS13190 - 2726879..2727214 (-) 336 WP_004908746.1 YegP family protein -
  R2H34_RS13195 - 2727400..2728122 (+) 723 WP_004908762.1 YgfZ/GcvT domain-containing protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14199.33 Da        Isoelectric Point: 4.7278

>NTDB_id=900508 R2H34_RS13175 WP_004640629.1 2723615..2723998(-) (pilG) [Acinetobacter sp. 16]
MEDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSLNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLSAIRNHVSA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=900508 R2H34_RS13175 WP_004640629.1 2723615..2723998(-) (pilG) [Acinetobacter sp. 16]
ATGGAAGATAAATTTCAAAATTTAAAAGTAATGGTGATTGACGATTCTAAAACGATTCGACGTACAGCTGAGACACTGTT
ACAACGCGAAGGTTGTGAGGTGATTACAGCTGTCGATGGTTTTGAAGCATTATCGAAAATTGCGGAAGCAAATCCTGATA
TCGTATTTGTCGATATTATGATGCCTCGTCTAGATGGTTACCAAACCTGTGCATTAATTAAAAACTCTCTAAATTATCAA
AATATTCCAGTAATCATGTTATCAAGCAAAGATGGTTTGTTTGATCAAGCCAAAGGGCGTGTTGTGGGGTCAGATGAATA
TTTAACTAAGCCATTTAGTAAAGATGAGCTGTTAAGTGCGATTCGTAACCACGTAAGCGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

96.85

100

0.969
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.228

89.764

0.37