Detailed information NTG0900486

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: R2H34_RS01515
• Genome accession: NZ_CP137746
• Coordinates: 326334..327764 (-)
• Length: 476 a.a.
• NCBI ID: WP_004917021.1
• Uniprot ID: -
• Organism: Acinetobacter sp. 16
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 321334..332764

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R2H34_RS01500	lptG	322376..323446 (+)	1071	WP_005403525.1	LPS export ABC transporter permease LptG	-
R2H34_RS01505	gpmI	323566..325110 (+)	1545	WP_005403526.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
R2H34_RS01510	-	325120..326295 (+)	1176	WP_005403527.1	S41 family peptidase	-
R2H34_RS01515	pilR	326334..327764 (-)	1431	WP_004917021.1	sigma-54-dependent transcriptional regulator	Regulator
R2H34_RS01520	pilS	327787..329352 (-)	1566	WP_004917019.1	sensor histidine kinase	Regulator
R2H34_RS01525	-	329368..330003 (-)	636	WP_004957336.1	response regulator	-
R2H34_RS01530	pbpG	330215..331276 (+)	1062	WP_005403528.1	D-alanyl-D-alanine endopeptidase PBP7/8	-
R2H34_RS01535	-	331440..332054 (+)	615	WP_004957343.1	DUF6915 family protein	-

Sequence

Protein

• Length: 476 a.a.
• Molecular weight: 53458.42 Da
• Isoelectric Point: 6.1504

>NTDB_id=900486 R2H34_RS01515 WP_004917021.1 326334..327764(-) (pilR) [Acinetobacter sp. 16]
MATKQPLVLLVDDEEDLCLLMQMTLARMGIKTHLAYRVEQAKKFFTEFQYDACLTDLNLPDGNGLDLVKHVTQNYPNTPI
AVLTAYGNMDIAIAALKAGAFDFVSKPVNQTHLDQLIQKALNRPQPEQEAVETALENKLLIGRSAPIQQLRIALKKIARS
QAPVFITGESGTGKEVVANLVHRLSNRSEGPFIAINCGAIPTELMESELFGHKKGSFTGATQDKQGLILSAHGGSLFLDE
IAELPLNMQVKLLRAVQEKKIRPVGSDQEIDVDFRVISASHQDLELLVQQGRFRQDLFFRIHVMDIVLPPLRERGQDILI
LANHFIQKISQEWELPVKSLTTRAEQFLLQQYFPGNVRELRNIIERAITLSDDETIDLAHLQTAPLRSSISIPSNAYVQS
DESEITLQSASPNPSSKKLPPEGLERYLENIEKEVLLNALNLTHWNRTLAAKKLGMTFRSLRYRLKKFGLDTEDDE

Nucleotide

• Length: 1431 bp

>NTDB_id=900486 R2H34_RS01515 WP_004917021.1 326334..327764(-) (pilR) [Acinetobacter sp. 16]
ATGGCAACTAAACAACCTCTCGTCTTACTCGTAGACGATGAAGAAGACTTATGTCTTCTTATGCAAATGACGCTCGCACG
TATGGGAATCAAAACTCATCTTGCATATCGTGTGGAGCAAGCCAAAAAATTCTTTACCGAGTTTCAGTACGATGCATGTC
TAACCGATCTTAACCTTCCAGATGGAAATGGTCTTGATCTTGTCAAACATGTGACTCAAAACTATCCAAACACACCAATC
GCTGTTCTTACTGCTTACGGAAATATGGACATTGCAATTGCAGCACTGAAAGCTGGGGCGTTTGACTTTGTTAGCAAACC
AGTGAATCAGACACATCTTGATCAACTGATTCAAAAAGCTTTAAACCGCCCTCAACCCGAACAAGAGGCGGTAGAAACAG
CCTTAGAAAACAAATTGCTGATTGGGCGTTCAGCACCTATTCAACAATTACGGATCGCTTTAAAAAAGATTGCCCGTTCA
CAAGCACCTGTTTTTATTACAGGTGAATCAGGAACAGGAAAAGAAGTTGTTGCGAACTTAGTTCATCGTTTAAGTAATCG
CAGCGAAGGACCTTTCATTGCCATCAACTGTGGTGCTATTCCAACAGAATTAATGGAAAGCGAATTATTCGGTCATAAGA
AAGGCAGCTTTACAGGTGCAACACAAGATAAACAAGGACTTATCTTATCTGCACACGGTGGCAGCCTTTTTTTAGATGAA
ATTGCAGAACTTCCCTTAAATATGCAAGTAAAACTTTTACGTGCAGTACAAGAGAAAAAAATTCGTCCAGTTGGATCAGA
TCAAGAAATTGATGTGGATTTCCGTGTGATTAGTGCCAGCCACCAAGATTTAGAACTCTTGGTTCAGCAAGGTCGCTTTA
GACAAGATTTATTCTTCCGCATTCATGTGATGGATATCGTATTGCCTCCACTTCGTGAACGTGGTCAAGATATCTTAATA
CTGGCAAATCATTTTATTCAAAAGATTAGCCAAGAATGGGAGTTACCTGTTAAATCCCTCACCACACGTGCAGAGCAATT
CCTCTTGCAGCAATATTTTCCAGGTAACGTTCGCGAACTTCGAAACATTATTGAACGAGCAATCACTCTCAGTGATGATG
AAACCATTGATTTGGCTCATTTGCAAACTGCACCTCTGCGTAGCTCAATCAGTATTCCTTCAAATGCTTATGTTCAGTCA
GATGAAAGTGAAATAACGCTGCAAAGTGCGAGTCCAAACCCAAGCTCTAAAAAATTACCGCCAGAAGGTTTGGAACGCTA
TTTAGAAAATATTGAAAAAGAAGTGTTATTGAATGCTTTAAATCTGACCCACTGGAATCGAACGCTAGCAGCAAAAAAAC
TTGGAATGACCTTCCGATCTTTACGCTATCGTTTGAAAAAGTTTGGTTTAGATACTGAGGATGATGAGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (428-468)

• Response regulator receiver domain (Response_reg) (8-117)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	84.034	100	0.84
pilR	Pseudomonas aeruginosa PAK	50.216	97.479	0.49