Detailed information NTG0899652

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: ABC807_RS01505
• Genome accession: NZ_CP156625
• Coordinates: 277456..278355 (+)
• Length: 299 a.a.
• NCBI ID: WP_000904833.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TL7/1993
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 272456..283355

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABC807_RS01475 (ABC807_01475)	-	272626..272920 (+)	295	Protein_261	hypothetical protein	-
ABC807_RS01480 (ABC807_01480)	-	273076..274290 (+)	1215	WP_000666469.1	pyridoxal phosphate-dependent aminotransferase	-
ABC807_RS01485 (ABC807_01485)	rpmH	274435..274569 (+)	135	WP_000831905.1	50S ribosomal protein L34	-
ABC807_RS01490 (ABC807_01490)	-	274853..275746 (+)	894	Protein_264	cell wall surface anchor protein	-
ABC807_RS01495 (ABC807_01495)	-	276051..276824 (+)	774	WP_000575638.1	TatD family hydrolase	-
ABC807_RS01500 (ABC807_01500)	rnmV	276824..277384 (+)	561	WP_000664448.1	ribonuclease M5	-
ABC807_RS01505 (ABC807_01505)	comR	277456..278355 (+)	900	WP_000904833.1	helix-turn-helix transcriptional regulator	Regulator
ABC807_RS01510 (ABC807_01510)	-	278675..278971 (+)	297	WP_000815392.1	lactococcin 972 family bacteriocin	-
ABC807_RS01515 (ABC807_01515)	-	279048..281078 (+)	2031	WP_000825257.1	bacteriocin-associated integral membrane family protein	-
ABC807_RS01520 (ABC807_01520)	-	281080..281721 (+)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
ABC807_RS01525 (ABC807_01525)	-	281714..282022 (+)	309	WP_000333257.1	hypothetical protein	-
ABC807_RS01530 (ABC807_01530)	rsmA	282153..283025 (+)	873	WP_001216856.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35335.16 Da
• Isoelectric Point: 4.8989

>NTDB_id=899652 ABC807_RS01505 WP_000904833.1 277456..278355(+) (comR) [Streptococcus pneumoniae strain TL7/1993]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLAYIARRLGVPVYSLMPDFSALPSAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMPQIIEKEAYSINDMLL
IRLFFYQMLIRKDLAKFINQIEKLMLFLLEQKKVTQIENYFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALRVERDFSLAESFYQSSKTFAKLIGDEFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=899652 ABC807_RS01505 WP_000904833.1 277456..278355(+) (comR) [Streptococcus pneumoniae strain TL7/1993]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGCCTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTTCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGCCTCAGATTATAGAAAAAGAAGCTTATTCAATAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAAAGCTAATGCTCTT
TCTTTTGGAACAGAAGAAGGTAACTCAAATAGAGAATTACTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGTAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGAAGCTAATTGGAGATGAATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	37.755	98.328	0.371
comR	Streptococcus suis P1/7	38.144	97.324	0.371
comR	Streptococcus suis 05ZYH33	38.144	97.324	0.371
comR	Streptococcus suis D9	36.12	100	0.361