NTDB

Overview

Name	recG	Type	Machinery gene
Locus tag	ABEP14_RS32045	Genome accession	NZ_CP156078
Coordinates	6782334..6784409 (+)	Length	691 a.a.
NCBI ID	WP_003096624.1	Uniprot ID	A0A0H2ZJ60
Organism	Pseudomonas aeruginosa strain P2550
Function	homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 6777334..6789409

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABEP14_RS32015 (ABEP14_32015)	-	6777756..6778136 (+)	381	WP_003096609.1	RidA family protein	-
ABEP14_RS32020 (ABEP14_32020)	-	6778191..6778922 (+)	732	WP_016852265.1	hypothetical protein	-
ABEP14_RS32025 (ABEP14_32025)	-	6778929..6779549 (-)	621	WP_003096613.1	LysE family translocator	-
ABEP14_RS32030 (ABEP14_32030)	-	6779616..6780416 (-)	801	WP_003114367.1	AraC family transcriptional regulator	-
ABEP14_RS32035 (ABEP14_32035)	-	6780416..6781267 (-)	852	WP_003121310.1	SDR family oxidoreductase	-
ABEP14_RS32040 (ABEP14_32040)	oxyR	6781405..6782337 (+)	933	WP_003096622.1	oxidative stress transcriptional regulator OxyR	-
ABEP14_RS32045 (ABEP14_32045)	recG	6782334..6784409 (+)	2076	WP_003096624.1	ATP-dependent DNA helicase RecG	Machinery gene
ABEP14_RS32050 (ABEP14_32050)	-	6784499..6785908 (+)	1410	WP_003114368.1	HDOD domain-containing protein	-
ABEP14_RS32055 (ABEP14_32055)	-	6785980..6786372 (-)	393	WP_016852266.1	hypothetical protein	-
ABEP14_RS32060 (ABEP14_32060)	-	6786508..6786780 (-)	273	WP_003096630.1	HU family DNA-binding protein	-
ABEP14_RS32065 (ABEP14_32065)	alkT	6786982..6788136 (-)	1155	WP_009877267.1	rubredoxin-NAD(+) reductase AlkT	-
ABEP14_RS32070 (ABEP14_32070)	-	6788188..6788355 (-)	168	WP_003098329.1	rubredoxin	-
ABEP14_RS32075 (ABEP14_32075)	-	6788539..6788706 (-)	168	WP_003098330.1	rubredoxin	-
ABEP14_RS32080 (ABEP14_32080)	-	6788840..6789241 (-)	402	WP_003098332.1	heme-binding protein	-

Sequence

Protein

Download Length: 691 a.a. Molecular weight: 76178.88 Da Isoelectric Point: 7.2591

                                >NTDB_id=899529 ABEP14_RS32045 WP_003096624.1 6782334..6784409(+) (recG) [Pseudomonas aeruginosa strain P2550]

MTELSRVPVTALKGVGAALAEKLARVGLETLQDILFHLPLRYQDRTRVTAIGALRPGADAVVEGVVAGADVVMGRRRSLL

VRLQDGSGTLSLRFYHFSQAQKDGLKRGTHLRCYGEVRPGASGLEIYHPEYRALNGDEPIPVEQTLTPIYPTTEGLTQQR

LRQLSQQALAMLGPSSLPDWLPAELARDYQLGPLDQAIRYLHRPPPDADIEELAEGRHWAQLRLAFEELLTHQLSLQRLR

EAVRSQAAPRLPAASRLPKRFLANLGFQPTGAQRRVGAEIAYDLAQDEPMLRLVQGDVGAGKTVVAALAALQAIEAGYQV

ALMAPTEILAEQHFLNFSKWLQPLDIEVAWLAGKLKGKARAAALERIGDGAPMVVGTHALFQDEVKFKRLALAIIDEQHR

FGVQQRLALRQKGVDGRLCPHQLIMTATPIPRTLAMSAYADLDTSILDELPPGRTPVNTVLVADSRRIEVIERVRAACRE

GRQAYWVCTLIEESEELTCQAAETTYEELSSALGELRVGLIHGRMKPADKAVVMEAFKEGMLQLLVATTVIEVGVDVPNA

SLMIIENPERLGLAQLHQLRGRVGRGSAASHCVLLYHPPLSQIGRERLGIMRETSDGFVIAEKDLELRGPGEMLGTRQTG

LLQFKVADLMRDADLLPAVRDAAQSLLAHWPQHVSPLLERWLRHGQQYGQV

Nucleotide

Download Length: 2076 bp

                                >NTDB_id=899529 ABEP14_RS32045 WP_003096624.1 6782334..6784409(+) (recG) [Pseudomonas aeruginosa strain P2550]

ATGACCGAGCTGTCCAGGGTCCCGGTTACCGCGCTAAAGGGCGTAGGCGCCGCGCTGGCGGAGAAGCTCGCTCGGGTAGG

CCTGGAAACCCTGCAGGACATCCTGTTCCACCTGCCCCTGCGCTACCAGGACCGTACCCGCGTCACCGCCATCGGCGCCC

TGCGGCCAGGGGCCGACGCGGTGGTCGAGGGCGTGGTGGCCGGCGCCGACGTGGTGATGGGGCGCCGCCGCAGCCTGCTG

GTGCGCCTGCAGGACGGCAGCGGCACCCTGAGCCTGCGCTTCTACCATTTCAGCCAGGCGCAGAAGGACGGTCTCAAGCG

CGGCACCCACCTGCGCTGCTACGGCGAAGTCCGGCCGGGTGCCTCGGGCCTGGAGATCTACCATCCGGAATACCGCGCGC

TGAACGGCGACGAGCCGATTCCGGTGGAGCAGACCCTGACGCCGATCTACCCGACTACCGAGGGCCTCACCCAGCAGCGC

CTGCGCCAGTTGAGCCAACAGGCCCTGGCCATGCTCGGCCCCAGCAGCCTGCCCGACTGGCTGCCGGCGGAACTGGCCCG

CGACTACCAACTTGGCCCGCTCGACCAGGCGATCCGCTACCTGCACCGGCCGCCGCCGGATGCCGACATCGAGGAACTGG

CCGAAGGCCGGCACTGGGCGCAGTTGCGCCTGGCCTTCGAAGAACTGCTGACCCACCAGTTATCCCTGCAGCGCCTGCGC

GAAGCCGTGCGCTCGCAGGCAGCGCCGCGCTTGCCGGCGGCCAGCCGCTTGCCGAAACGCTTCCTTGCCAACCTCGGCTT

CCAGCCGACCGGCGCGCAACGCCGGGTCGGCGCGGAGATCGCCTACGACCTGGCCCAGGACGAACCGATGCTGCGCCTGG

TGCAAGGCGACGTCGGCGCCGGCAAGACCGTGGTCGCCGCCCTCGCCGCCCTGCAAGCCATAGAGGCCGGTTACCAGGTG

GCGCTGATGGCGCCGACCGAGATCCTCGCCGAGCAGCATTTCCTCAACTTCAGCAAGTGGCTCCAGCCGCTGGACATCGA

AGTCGCCTGGCTGGCCGGCAAGCTCAAGGGCAAGGCCCGCGCGGCGGCACTGGAACGCATCGGCGACGGCGCGCCGATGG

TGGTCGGCACCCACGCGCTGTTCCAGGATGAAGTGAAATTCAAGCGCCTTGCACTGGCGATCATCGACGAACAGCACCGC

TTCGGCGTGCAGCAGCGCCTGGCCCTGCGCCAGAAGGGCGTGGACGGCAGGCTCTGCCCACACCAGTTGATCATGACCGC

CACGCCGATCCCGCGGACCCTGGCGATGAGCGCCTATGCCGACCTCGACACCTCGATCCTCGACGAGCTGCCGCCCGGGC

GTACCCCGGTGAATACCGTGCTGGTGGCCGACAGCCGCCGTATCGAGGTGATCGAGCGAGTCCGCGCGGCTTGCCGCGAA

GGGCGCCAGGCCTACTGGGTGTGTACCCTGATCGAAGAGTCCGAGGAGCTTACCTGCCAGGCCGCCGAGACCACCTACGA

AGAGCTTTCCTCGGCGCTGGGCGAACTGCGTGTCGGCCTGATCCACGGGCGCATGAAGCCGGCGGACAAGGCCGTGGTGA

TGGAGGCCTTCAAGGAAGGCATGTTGCAACTGCTGGTGGCGACCACGGTGATCGAGGTCGGCGTCGACGTGCCCAACGCC

AGCCTGATGATCATCGAGAACCCCGAGCGCCTTGGCCTGGCCCAACTGCACCAGCTACGCGGCCGGGTTGGCCGGGGCAG

CGCCGCCAGCCACTGCGTGCTGCTCTACCACCCACCGCTGTCGCAGATCGGCCGCGAGCGGCTGGGCATCATGCGCGAAA

CCAGCGACGGCTTCGTCATCGCCGAGAAGGACCTGGAATTGCGCGGCCCCGGCGAAATGCTCGGCACCCGCCAGACCGGC

CTGCTGCAATTCAAGGTCGCCGACCTGATGCGCGACGCAGACCTGCTGCCGGCGGTCCGCGATGCCGCCCAATCCCTCCT

GGCGCACTGGCCGCAGCATGTCAGCCCGCTGCTCGAACGGTGGTTGCGCCACGGCCAGCAATACGGTCAAGTGTGA

Domains

Predicted by InterProScan.

DEAD/DEAH box helicase (DEAD)

(293-430)

Helicase conserved C-terminal domain (Helicase_C)

(479-586)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(614-675)

RecG wedge domain (RecG_wedge)

(12-170)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure
AlphaFold DB	A0A0H2ZJ60

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
recG	Neisseria meningitidis strain C311	50.373	97.106	0.489
recG/mmsA	Streptococcus pneumoniae R6	40.868	96.671	0.395
recG/mmsA	Streptococcus pneumoniae R36A	40.868	96.671	0.395
recG	Bacillus subtilis subsp. subtilis str. 168	40.356	97.54	0.394

Detailed information NTG0899529