Detailed information NTG0089757

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: OHP008_RS02620
• Genome accession: NZ_AP024965
• Coordinates: 549963..550763 (+)
• Length: 266 a.a.
• NCBI ID: WP_180503901.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain #8
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 544963..555763

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHP008_RS02585	pseH	545466..546008 (+)	543	WP_223888763.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
OHP008_RS02590 (OHP008_05220)	-	545941..546879 (-)	939	WP_223888609.1	tetraacyldisaccharide 4'-kinase	-
OHP008_RS02595 (OHP008_05230)	-	546876..547658 (-)	783	WP_223888610.1	NAD+ synthase	-
OHP008_RS02605 (OHP008_05240)	ilvC	547909..548901 (+)	993	WP_223888611.1	ketol-acid reductoisomerase	-
OHP008_RS02610 (OHP008_05250)	minD	548920..549726 (+)	807	WP_223888612.1	septum site-determining protein MinD	-
OHP008_RS02615 (OHP008_05260)	minE	549723..549956 (+)	234	WP_154426255.1	cell division topological specificity factor MinE	-
OHP008_RS02620 (OHP008_05270)	dprA	549963..550763 (+)	801	WP_180503901.1	DNA-processing protein DprA	Machinery gene
OHP008_RS02625 (OHP008_05280)	dprB	550760..551164 (+)	405	WP_180497313.1	Holliday junction resolvase RuvX	Machinery gene
OHP008_RS02630 (OHP008_05290)	-	551396..551848 (+)	453	WP_180445412.1	tetratricopeptide repeat protein	-
OHP008_RS02635 (OHP008_05300)	-	552034..552372 (+)	339	WP_000699885.1	hypothetical protein	-
OHP008_RS02640 (OHP008_05310)	-	552356..552916 (+)	561	WP_223888613.1	hypothetical protein	-
OHP008_RS02645 (OHP008_05320)	-	553004..553885 (-)	882	WP_223888614.1	RluA family pseudouridine synthase	-
OHP008_RS02650 (OHP008_05330)	recJ	553885..555435 (-)	1551	WP_223888615.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29866.82 Da
• Isoelectric Point: 8.7867

>NTDB_id=89757 OHP008_RS02620 WP_180503901.1 549963..550763(+) (dprA) [Helicobacter pylori strain #8]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDTKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDVVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYFAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHLVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=89757 OHP008_RS02620 WP_180503901.1 549963..550763(+) (dprA) [Helicobacter pylori strain #8]
ATGAAAAGTAATTTCCAATACAGCGCGCTAGAAAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAACT
CTATTGTGTGGGCGATACCAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACCATCACTCTAGCTAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTGATCTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGTAGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGTAGCGCGAGATTAGCCCAAAAATACCAAAAACCCTTATTTGTTTTACCCCAACGCCTGAATGAAAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTTTGCGAAAAACCCTAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAGCGCATCAATCATCTCGTGGTGTTAGCATG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.617	100	0.966
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	47.788	84.962	0.406