Detailed information NTG0089736

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LDM87_RS05655
• Genome accession: NZ_AP024964
• Coordinates: 1188476..1189276 (-)
• Length: 266 a.a.
• NCBI ID: WP_223892694.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain #6
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1183476..1194276

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LDM87_RS05605	-	1184194..1184979 (-)	786	WP_223892690.1	hypothetical protein	-
LDM87_RS05610	-	1184979..1185365 (-)	387	WP_223892691.1	DUF1294 domain-containing protein	-
LDM87_RS05615 (OHP006_11230)	-	1185450..1185644 (-)	195	WP_172414439.1	hypothetical protein	-
LDM87_RS05620	-	1185702..1185863 (-)	162	WP_014536434.1	lysozyme	-
LDM87_RS05625 (OHP006_11240)	-	1185911..1186381 (-)	471	WP_223892692.1	glycoside hydrolase family protein	-
LDM87_RS05630 (OHP006_11250)	-	1186392..1186952 (-)	561	WP_000043918.1	hypothetical protein	-
LDM87_RS05635 (OHP006_11260)	-	1186936..1187274 (-)	339	WP_000699916.1	hypothetical protein	-
LDM87_RS05640 (OHP006_11270)	-	1187475..1187967 (-)	493	Protein_1112	tetratricopeptide repeat protein	-
LDM87_RS05650 (OHP006_11280)	dprB	1188075..1188479 (-)	405	WP_075645903.1	Holliday junction resolvase RuvX	Machinery gene
LDM87_RS05655 (OHP006_11290)	dprA	1188476..1189276 (-)	801	WP_223892694.1	DNA-processing protein DprA	Machinery gene
LDM87_RS05660 (OHP006_11300)	minE	1189288..1189521 (-)	234	WP_130777953.1	cell division topological specificity factor MinE	-
LDM87_RS05665 (OHP006_11310)	minD	1189518..1190324 (-)	807	WP_223892695.1	septum site-determining protein MinD	-
LDM87_RS05670 (OHP006_11320)	ilvC	1190349..1191341 (-)	993	WP_223892696.1	ketol-acid reductoisomerase	-
LDM87_RS05680 (OHP006_11330)	-	1191590..1192372 (+)	783	WP_223892697.1	NAD+ synthase	-
LDM87_RS05685 (OHP006_11340)	-	1192369..1193307 (+)	939	WP_223892698.1	tetraacyldisaccharide 4'-kinase	-
LDM87_RS05690 (OHP006_11350)	pseH	1193240..1193782 (-)	543	WP_223892699.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29811.75 Da
• Isoelectric Point: 9.1549

>NTDB_id=89736 LDM87_RS05655 WP_223892694.1 1188476..1189276(-) (dprA) [Helicobacter pylori strain #6]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDTKLLRAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=89736 LDM87_RS05655 WP_223892694.1 1188476..1189276(-) (dprA) [Helicobacter pylori strain #6]
ATGAAAAGCAACTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATACTAAGCTTTTGAGAGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGTGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCCACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTAGTGATTGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCTAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCTCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACTCTTTTAAAAGACC
ACCATTTAAAAGAGATGCCTGAAATCAAAGATGAATTTTTGGAATATTGCGCCAAAAACCCAAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.617	100	0.966
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414