Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG/mmsA   Type   Machinery gene
Locus tag   ABC812_RS07960 Genome accession   NZ_CP155537
Coordinates   1575215..1577230 (-) Length   671 a.a.
NCBI ID   WP_001048745.1    Uniprot ID   Q7ZAK6
Organism   Streptococcus pneumoniae strain DP1322     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1570215..1582230
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABC812_RS07945 (ABC812_07940) - 1572797..1573024 (-) 228 WP_000576349.1 hypothetical protein -
  ABC812_RS07950 (ABC812_07945) - 1573425..1573565 (+) 141 WP_001808987.1 hypothetical protein -
  ABC812_RS07955 (ABC812_07950) - 1573919..1574899 (-) 981 WP_000795124.1 acetylxylan esterase -
  ABC812_RS07960 (ABC812_07955) recG/mmsA 1575215..1577230 (-) 2016 WP_001048745.1 ATP-dependent DNA helicase RecG Machinery gene
  ABC812_RS07965 (ABC812_07960) alr 1577249..1578352 (-) 1104 WP_000648075.1 alanine racemase -
  ABC812_RS07970 (ABC812_07965) acpS 1578342..1578704 (-) 363 WP_000635008.1 holo-ACP synthase -
  ABC812_RS07975 (ABC812_07970) - 1578749..1579780 (-) 1032 WP_000864060.1 3-deoxy-7-phosphoheptulonate synthase -
  ABC812_RS07980 (ABC812_07975) - 1579782..1580813 (-) 1032 WP_000232212.1 3-deoxy-7-phosphoheptulonate synthase -

Sequence

Protein


Download         Length: 671 a.a.        Molecular weight: 75188.76 Da        Isoelectric Point: 6.1845

>NTDB_id=897302 ABC812_RS07960 WP_001048745.1 1575215..1577230(-) (recG/mmsA) [Streptococcus pneumoniae strain DP1322]
MNLHQPLHVLPGVGPKSAEKYAKLGIENLQDLLLYFPFRYEDFKTKQVLELEDGEKAVLSGQVVTPASVQYYGFKRNRLR
FSLKQGEVVFAVNFFNQPYLADKIELGATLAVFGKWDRAKASLTGMKVLAQVEDDLQPVYRLAQGISQASLVKVIKTAFD
QGLDLLIEENLPQSLLDKYKLMSRCQAVRAMHFPKDLAEYKQALRRIKFAELFYFQMQLQTLKSENRVQGSGLVLNWSQE
KVTAVKASLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTAGYQAALMVPTEILAEQHFES
LQNLFPNLKLALLTGSLKAAEKREVLETIAKGEADLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREKGDNPD
VLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVTRWIKHEQLPQVLTWLEGEIQKGSQAYVISPLIEESEALDLKN
AIALSEELTTHFAGKAEVALLHGRMKSDEKDQIMQDFKERKTDILVSTTVIEVGVNVPNATVMIIMDADRFGLSQLHQLR
GRVGRGDKQSYAVLVANPKTDSGKDRMRIMTETTNGFVLAEEDLKMRGSGEIFGTRQSGLPEFQVADIIEDFPILEEARK
VASYISSIEAWQEDPEWRMIALHLEKKEHLD

Nucleotide


Download         Length: 2016 bp        

>NTDB_id=897302 ABC812_RS07960 WP_001048745.1 1575215..1577230(-) (recG/mmsA) [Streptococcus pneumoniae strain DP1322]
ATGAATCTACATCAACCCTTGCATGTCTTGCCTGGTGTGGGACCAAAGTCAGCAGAAAAATACGCCAAACTAGGAATTGA
AAACTTGCAAGATCTCTTGCTCTACTTTCCTTTCCGTTATGAAGACTTCAAAACCAAGCAGGTGCTGGAGCTGGAAGACG
GTGAGAAGGCAGTTCTTTCTGGTCAGGTAGTGACTCCTGCTAGTGTCCAGTATTATGGTTTCAAGCGCAATCGCCTGCGT
TTTAGTCTCAAGCAGGGAGAGGTCGTTTTTGCGGTGAATTTCTTTAACCAGCCCTATCTGGCTGATAAAATAGAGTTGGG
AGCAACCCTTGCTGTCTTTGGAAAATGGGACCGCGCTAAGGCTAGTCTGACTGGGATGAAGGTTCTGGCTCAGGTAGAAG
ATGACCTCCAGCCTGTCTATCGTCTGGCTCAGGGAATCAGTCAGGCCAGTCTGGTTAAGGTCATCAAGACGGCTTTTGAT
CAGGGACTGGACCTCTTGATAGAAGAAAATCTGCCCCAGTCTTTACTAGACAAATACAAACTCATGTCCCGTTGTCAGGC
AGTCCGAGCTATGCATTTTCCAAAGGATTTGGCAGAATACAAGCAGGCTCTTCGCCGTATCAAGTTTGCGGAACTCTTTT
ATTTCCAAATGCAGTTGCAGACGCTCAAGTCTGAAAATAGAGTTCAGGGAAGTGGTCTGGTTCTGAATTGGTCTCAGGAA
AAAGTGACAGCAGTTAAAGCAAGTCTTCCTTTTGCCCTGACCCAAGCTCAGGAAAAGAGTTTGCAGGAAATTTTAACTGA
TATGAAGTCCGACCACCACATGAATCGTCTCCTACAAGGGGATGTGGGGAGTGGAAAAACGGTAGTCGCTGGCTTGGCCA
TGTTTGCGGCAGTGACAGCAGGTTATCAGGCTGCCCTAATGGTACCAACAGAAATCCTCGCAGAGCAACACTTTGAGAGT
TTACAGAACCTTTTTCCCAATTTGAAACTGGCTCTCTTGACAGGTTCCTTGAAAGCTGCAGAAAAGAGAGAAGTCTTGGA
GACCATTGCCAAGGGTGAGGCTGATTTGATTATAGGAACTCACGCTCTGATACAAGATGGGGTGGAGTATGCTCGTCTTG
GTTTGATTATTATCGATGAGCAGCACCGTTTTGGTGTAGGGCAAAGGCGTATTTTACGGGAAAAAGGTGACAATCCAGAT
GTCCTCATGATGACGGCGACTCCCATTCCACGGACGCTTGCCATCACAGCCTTTGGAGATATGGATGTTTCCATTATCGA
CCAGATGCCAGCAGGTCGGAAGCCTATTGTGACGCGCTGGATCAAACATGAGCAACTACCTCAGGTCTTGACTTGGTTAG
AGGGGGAAATTCAAAAAGGTTCCCAAGCCTATGTCATCTCTCCTTTGATTGAAGAATCAGAAGCTCTAGATTTGAAAAAT
GCCATTGCCTTATCAGAGGAGTTGACGACTCATTTTGCAGGCAAGGCAGAGGTGGCTCTTCTACATGGTAGGATGAAGAG
TGACGAAAAAGACCAGATCATGCAGGATTTCAAGGAGAGAAAGACGGATATTCTGGTTTCGACGACGGTTATTGAGGTTG
GGGTCAACGTTCCCAATGCGACTGTCATGATTATCATGGATGCCGATCGCTTCGGTCTCAGTCAACTTCACCAGCTTAGA
GGTCGTGTCGGTCGGGGGGACAAGCAGTCCTACGCTGTTCTCGTTGCCAATCCCAAGACGGATTCTGGGAAAGACCGCAT
GCGCATCATGACAGAAACGACCAATGGATTTGTCCTTGCGGAGGAAGATTTGAAAATGCGTGGTTCTGGTGAGATTTTTG
GAACCAGACAGTCAGGACTTCCAGAGTTCCAAGTGGCTGATATTATCGAAGATTTTCCGATTTTAGAAGAAGCAAGAAAG
GTTGCTAGCTACATTAGTTCTATAGAAGCTTGGCAAGAAGATCCAGAGTGGCGCATGATTGCCCTTCATCTGGAAAAGAA
AGAACATCTGGATTAA

Domains

Predicted by InterProScan.

Helicase conserved C-terminal domain (Helicase_C)

(456-566)

DEAD/DEAH box helicase (DEAD)

(254-411)

RecG wedge domain (RecG_wedge)

(11-158)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(593-665)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q7ZAK6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG/mmsA Streptococcus pneumoniae R6

100

100

1
  recG/mmsA Streptococcus pneumoniae R36A

100

100

1
  recG Bacillus subtilis subsp. subtilis str. 168

48.968

100

0.495
  recG Neisseria meningitidis strain C311

38.872

100

0.39